Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00973
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical pr...    42   3e-04
Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical p...    42   3e-04

>Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = +3

Query: 267 IMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXX 446
           ++S + PA  CE  +++ Q  L+     SG + S+ FWG + D FGR+            
Sbjct: 102 LLSLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACI 161

Query: 447 XXXXQSTVPDYRLLLAARTIKG 512
                   P + +LL  R + G
Sbjct: 162 MGVISGMSPHFYVLLFFRGLTG 183


>Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = +3

Query: 267 IMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXX 446
           ++S + PA  CE  +++ Q  L+     SG + S+ FWG + D FGR+            
Sbjct: 102 LLSLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACI 161

Query: 447 XXXXQSTVPDYRLLLAARTIKG 512
                   P + +LL  R + G
Sbjct: 162 MGVISGMSPHFYVLLFFRGLTG 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,648,991
Number of Sequences: 27780
Number of extensions: 366196
Number of successful extensions: 834
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)