Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00972
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3D5S5 Cluster: Putative uncharacterized protein; n=7; ...    35   1.8  
UniRef50_A4VEI2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_UPI00015A451E Cluster: UPI00015A451E related cluster; n...    33   9.4  
UniRef50_Q7RC87 Cluster: Putative uncharacterized protein PY0589...    33   9.4  

>UniRef50_Q3D5S5 Cluster: Putative uncharacterized protein; n=7;
           Streptococcus agalactiae|Rep: Putative uncharacterized
           protein - Streptococcus agalactiae COH1
          Length = 177

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 481 GSELMKSASFHHYILQPIHSNN*ASEPERTKCPSLCSLLFVYFCIYLCVL*MYIDT 648
           G+ L  + S +H +   I     +  P  T C  L    F+YFCI+L V+  Y+++
Sbjct: 34  GNLLFATTSLYHILSSIIAWFTVSKYPTETACTLLALTFFLYFCIFLIVIPSYLNS 89


>UniRef50_A4VEI2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 223

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 20/75 (26%), Positives = 37/75 (49%)
 Frame = +2

Query: 446 CIKHLL*KRLDLEVN**KAQVFIIIFYSQFTVIIEHQSQNAPSVHHCVVYCLCTFVYICV 625
           C  +   K  D+++N       I+  +SQ      HQSQN P+ H+C  +   + ++IC+
Sbjct: 34  CFSYFFIKNADIQIN------QIMFLFSQTC----HQSQNFPN-HNCKFFQTYSLIFICI 82

Query: 626 FYKCTLTLNKMCSML 670
           ++  ++T    C  L
Sbjct: 83  YFFESVTYFVFCRCL 97


>UniRef50_UPI00015A451E Cluster: UPI00015A451E related cluster; n=1;
           Danio rerio|Rep: UPI00015A451E UniRef100 entry - Danio
           rerio
          Length = 991

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 533 FTVIIEHQSQNAPSVHHCVVYCLCTFVYICVF 628
           F +II      A + H  ++YC+CT+ ++CV+
Sbjct: 748 FIIIIIVNPVTATAQHLKLIYCICTYTHVCVY 779


>UniRef50_Q7RC87 Cluster: Putative uncharacterized protein PY05897;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05897 - Plasmodium yoelii yoelii
          Length = 658

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 515 IIFYSQFTVIIEHQSQNAPSVHHCVVYCLCTFVYICV 625
           I+FY   T  + H     P+V HC+VY L T V I +
Sbjct: 260 IVFYDYKTKHLSHDFIFIPNVLHCLVYILLTIVVILI 296


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,342,174
Number of Sequences: 1657284
Number of extensions: 12127489
Number of successful extensions: 26411
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26227
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)