Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00972
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   2.5  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   7.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.6  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 626 THKYIQKYTNSKLHN 582
           THKY  KY N  L N
Sbjct: 23  THKYTTKYDNIDLEN 37


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 578 HHCVVYCLCTFVYICV 625
           H C  +CL   ++ CV
Sbjct: 8   HLCAQFCLLAAIFTCV 23


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 685 VTSSS*HRTHFIKCQCTFIKHTN 617
           + SS+  R  FI+   TFIK  N
Sbjct: 267 MVSSANRRREFIRSAITFIKQYN 289


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 252 LCRICRRLD 278
           LCR+C+R+D
Sbjct: 276 LCRLCKRVD 284


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 252 LCRICRRLD 278
           LCR+C+R+D
Sbjct: 276 LCRLCKRVD 284


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 252 LCRICRRLD 278
           LCR+C+R+D
Sbjct: 276 LCRLCKRVD 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,249
Number of Sequences: 336
Number of extensions: 3826
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)