Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00972
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    29   0.19 
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    25   2.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.6  

>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 600 CVLLY-IFVCFINVH*HLIKCVRCYEEDVTR 689
           C L Y  F C++  + +L+ C R Y ED TR
Sbjct: 132 CCLAYDSFRCYLQHYGNLVPCARFYPEDETR 162


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 6   MLISKNFVVSFLAKFRHFYWHCNPVYKVTKNI 101
           M++  +++   L++   FYWH N V + +  I
Sbjct: 282 MIMIGSYIFMILSQMFAFYWHANEVLEQSLGI 313


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 667  HRTHFIKCQCTFIKHTNIYKSTQTVNYTMMDTW 569
            ++ H   C  T I HT + +   TVN    D++
Sbjct: 945  NKPHVFDCYTTVIPHTVLTQYNYTVNTDEKDSF 977



 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 371  FKFQIIATNQSIYLKNTTSIYKIELCIKH 457
            FK   IAT ++++  NTT   +++L + +
Sbjct: 1116 FKIVSIATGETLFDTNTTKSEELQLTVPY 1144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,719
Number of Sequences: 2352
Number of extensions: 13339
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)