Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00971
(743 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 86 6e-18
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 33 0.033
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 33 0.043
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 33 0.057
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 32 0.075
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 32 0.075
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 32 0.099
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 31 0.13
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 31 0.13
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.13
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 31 0.17
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 31 0.23
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 31 0.23
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 30 0.30
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 30 0.30
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 30 0.40
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 30 0.40
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc... 29 0.53
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 0.70
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 29 0.92
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 0.92
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 28 1.2
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 28 1.2
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 28 1.6
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 28 1.6
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 28 1.6
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 27 2.1
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 27 2.8
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 3.7
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 3.7
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 4.9
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 26 4.9
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 26 4.9
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 6.5
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 26 6.5
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 26 6.5
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 6.5
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 25 8.6
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 25 8.6
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 25 8.6
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 25 8.6
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 8.6
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 8.6
SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces pomb... 25 8.6
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 85.8 bits (203), Expect = 6e-18
Identities = 49/141 (34%), Positives = 72/141 (51%)
Frame = +3
Query: 87 ALEAQLQVRFITKQEQYAVPDSPYAIQCNVTPCGP*YLNQRNFEGDLTIVREGGNIDFLV 266
A Q+QVRF T+ E AV D+P + ++ G L+Q L + DFLV
Sbjct: 6 APSGQVQVRFTTRNEDLAVGDTPIFVPTSLKRYG---LSQ--IVNHLLKTEKPTPFDFLV 60
Query: 267 CGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSG 446
G+LL +L E++ + G+STE L++EY++ P HDDW+S +Q S IL+
Sbjct: 61 QGQLLKTTLDEYIVQNGLSTESILDIEYIQSTLPPAYLASFSHDDWISGIQLTSDTILTS 120
Query: 447 SYDNSLHIWSTKGQHKLAIPG 509
SYD +W G+ K G
Sbjct: 121 SYDGIARVWDKSGEIKFQSTG 141
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 33.5 bits (73), Expect = 0.033
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECL--SVSADGNRFAS 712
VS D VSGS D+T + +WN+ N IT GH + C+ S + D F S
Sbjct: 111 VSISPDNRQVVSGSRDKT--IKIWNIIGN-CKYTITDGGHSDWVSCVRFSPNPDNLTFVS 167
Query: 713 GSW 721
W
Sbjct: 168 AGW 170
Score = 30.3 bits (65), Expect = 0.30
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYR---GHDKGIECLSVSADGNRFASGSW 721
+SGS D++ IL WN+ R+ V+ + R GH + ++S D + S SW
Sbjct: 32 LSGSRDKSIIL--WNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASW 83
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASG 715
D TFVS D+ + VW++ S+ ++ GH + +++S DG+ ASG
Sbjct: 161 DNLTFVSAGWDKA--VKVWDLETFSL--RTSHYGHTGYVSAVTISPDGSLCASG 210
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
VS + D +S S D+T LW +C + GH + +S+S D +
Sbjct: 66 VSDCALSFDSHYALSASWDKTIRLW----DLEKGECTHQFVGHTSDVLSVSISPDNRQVV 121
Query: 710 SGS 718
SGS
Sbjct: 122 SGS 124
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.1 bits (72), Expect = 0.043
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILW----VWNVPRNSVD----CMITYRGHDKGIECL 679
++V V+F D VSGS D T LW V NV + C T+ GH I +
Sbjct: 459 ESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSV 518
Query: 680 SVSADGNRFASGS 718
+VS DG SGS
Sbjct: 519 TVSPDGKWIISGS 531
Score = 31.9 bits (69), Expect = 0.099
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V+F D +G DQ + +W++ + V ++T GH++ I L S DG SGS
Sbjct: 340 VAFSPDGKYLATGVEDQQ--IRIWDIAQKRVYRLLT--GHEQEIYSLDFSKDGKTLVSGS 395
Score = 29.9 bits (64), Expect = 0.40
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 393 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQH-KLAIPG 509
H D++ +V WI+SGS D ++ WS H +L + G
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQG 552
Score = 29.5 bits (63), Expect = 0.53
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+ F D T VSGS D+T L W+V ++ D G+ + S DG A+GS
Sbjct: 382 LDFSKDGKTLVSGSGDRTVCL--WDVEAGEQKLIL---HTDDGVTTVMFSPDGQFIAAGS 436
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
V+ V F D +GS D+ +W +S + GH++ + ++ S DG
Sbjct: 420 VTTVMFSPDGQFIAAGSLDKVIRIWT-----SSGTLVEQLHGHEESVYSVAFSPDGKYLV 474
Query: 710 SGS-------WG*QCLS 739
SGS W QC+S
Sbjct: 475 SGSLDNTIKLWELQCVS 491
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 32.7 bits (71), Expect = 0.057
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
VS + F VSGS D+T + +WN+ + C+ H + I +S+SADG A
Sbjct: 141 VSSIDFNPLGTLLVSGSWDET--VRIWNLQDGT--CLRMLPAHSEPIISVSISADGTLCA 196
Query: 710 SGSW 721
+ S+
Sbjct: 197 TASY 200
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 32.3 bits (70), Expect = 0.075
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK 482
H +S++Q S+ + SGSYDNS+ IW +
Sbjct: 535 HTAPISSLQFDSNHLYSGSYDNSVRIWDLR 564
Score = 29.5 bits (63), Expect = 0.53
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWS 476
H D+VS + S+I +GS D ++ +W+
Sbjct: 373 HSDYVSCLAIQDSFIATGSMDTTVRLWN 400
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.3 bits (70), Expect = 0.075
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 572 SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
+GS D I ++W+V + + T GH+ + LS ++ G+ ASGSW
Sbjct: 441 AGSQDSFEI-FMWSVQTGQL--LETLAGHEGPVSSLSFNSSGSLLASGSW 487
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 31.9 bits (69), Expect = 0.099
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 548 QGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
Q DQ +SGS D+T + +WN R S +C+ GH + CL+ D SGS
Sbjct: 320 QFDQCKLISGSMDKT--IRIWNY-RTS-ECISILHGHTDSVLCLTF--DSTLLVSGS 370
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAI 503
H D V +Q + + SGSYD ++ +W+ ++A+
Sbjct: 272 HSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVAL 308
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
D VSGS D T LW ++ + IT RGH + + + D SGS
Sbjct: 362 DSTLLVSGSADCTVKLWHFSGGKR-----ITLRGHTGPVNSVRIIRDRGLVLSGS 411
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAI 503
H V+ +Q ++SGS D ++ IW+ + ++I
Sbjct: 312 HSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISI 348
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPG 509
H D V + S+ ++SGS D ++ +W G ++ + G
Sbjct: 352 HTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRG 390
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +3
Query: 369 PTPQDCLM---HDDWVSAVQAHSS---WILSGSYDNSLHIWSTK 482
P +DCL H D+V+++ H + LSGS D L +WS K
Sbjct: 337 PVRKDCLCCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSIK 380
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 31.5 bits (68), Expect = 0.13
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V+ D +SGS D++ W ++ + C +GH + + S DG +FASGS
Sbjct: 544 VAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTC----QGHKNSVISVCFSPDGRQFASGS 599
Score = 30.3 bits (65), Expect = 0.30
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRN--------SVDCMITYRGHDKGIECL 679
++V ++F D + +SGS D+T +W R+ C TY GH + +
Sbjct: 485 ESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSV 544
Query: 680 SVSADGNRFASGS 718
+VS D SGS
Sbjct: 545 AVSPDSRWGLSGS 557
Score = 29.5 bits (63), Expect = 0.53
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 393 HDDWVS--AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPG 509
H D+V AV S W LSGS D S+ W + GQ L G
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQG 578
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
V ++F D V+G+ D+ LW + + + GH++ I L S +G
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQK----VRYVFSGHEQDIYSLDFSHNGRFIV 418
Query: 710 SGS 718
SGS
Sbjct: 419 SGS 421
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.5 bits (68), Expect = 0.13
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
V V+F + A ++GS D+T L W+V R + + GH + + ++++ DG+ A
Sbjct: 466 VDCVTFHPNSAYVLTGSSDKTCRL--WDVHRG--HSVRVFNGHTQPVTAVAIAPDGHTMA 521
Query: 710 S 712
S
Sbjct: 522 S 522
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 566 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
F + SHDQTA LW + + + + GH ++C++ + +GS
Sbjct: 436 FATASHDQTAQLW----SCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGS 482
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 31.1 bits (67), Expect = 0.17
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 563 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 685
T VSGS D+T + VWN+ + C +RGH I CL +
Sbjct: 403 TLVSGSIDKT--VRVWNIEK--AKCTHIFRGHISIIRCLEI 439
Score = 31.1 bits (67), Expect = 0.17
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIW 473
H D V + + ++SGSYD+S+ IW
Sbjct: 506 HTDSVRTISGYGDILVSGSYDSSIRIW 532
Score = 29.1 bits (62), Expect = 0.70
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWS 476
H + V AV+ H + ++SGS D ++ +W+
Sbjct: 390 HKEGVWAVKIHENTLVSGSIDKTVRVWN 417
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIP 506
HD +V+ + + ++SGS D+++ IW G+ + +P
Sbjct: 588 HDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLP 626
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 566 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
F + SHDQTA L W+V + + + GH ++C+S + A+GS
Sbjct: 460 FATASHDQTARL--WDVEHAAP--LRVFVGHQNDVDCVSFHPNAAYLATGS 506
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.7 bits (66), Expect = 0.23
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +2
Query: 521 VKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 700
V AV ++ D VS S D T L VW+V S GH+ + + S DG
Sbjct: 431 VAAVYQCAWSTDSRLLVSSSQDTT--LKVWDV--RSKKMKFDLPGHEDQVFAVDWSPDGQ 486
Query: 701 RFASG 715
R ASG
Sbjct: 487 RVASG 491
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
VS S D ILW P+ S + GH K + S S DG A+ S+
Sbjct: 362 VSASDDLQLILWD---PQKSTKPITKMHGHQKVVNHASFSPDGRCIATASF 409
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V+GS D TA LW + + T +GH + C++ + D + A+GS
Sbjct: 151 VTGSGDFTARLWDCDTQTP----IATMKGHTNWVSCVAWAPDASIIATGS 196
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 429 SWILSGSYDNSLHIWSTK 482
+WI S SYD ++ IW K
Sbjct: 281 NWIYSSSYDKTIRIWDAK 298
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.30
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 653 GHDKGIECLSVSADGNRFASGSWG*QCLSL 742
GH+ I L++++DG A+GSW +C+ L
Sbjct: 272 GHENRISSLALTSDGTMLATGSWD-ECVRL 300
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 30.3 bits (65), Expect = 0.30
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLS 682
++ +SGS D + I VW+V + GH +GIEC++
Sbjct: 143 EEGLLLSGSTDASLI--VWDVSSQPSRLLYKLTGHSRGIECIT 183
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 572 SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+GS D T + WNV ++ +C+ T GH ++CL + + SGS
Sbjct: 107 TGSWDHT--IKKWNV--STGECVETLIGHTDYVKCLLLLEEEGLLLSGS 151
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 653 GHDKGIECLSVSADGNRFASGSWG*Q 730
G ++ I + S +GN FASGSWG Q
Sbjct: 170 GGERPIAIVRFSNNGNHFASGSWGGQ 195
Score = 26.6 bits (56), Expect = 3.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILW-VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRF 706
V V+F VS S D T W +W+V V+ ++ GH +GI ++ DG+
Sbjct: 268 VGRVAFHPSGDYLVSASFDTT---WRLWDV-HTGVE-LLMQEGHSEGIFSIACQPDGSLV 322
Query: 707 ASG 715
+SG
Sbjct: 323 SSG 325
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 705 LQVGAGDNNVCLW 743
L GA DN VCLW
Sbjct: 238 LATGAADNTVCLW 250
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIW--STKGQH 491
H+D + V+ + I+SG YD ++ IW +T QH
Sbjct: 428 HEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQH 462
Score = 29.5 bits (63), Expect = 0.53
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 548 QGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
Q D VSGS D+T + VW+V NS + GH + CL N SGS
Sbjct: 228 QYDDEIMVSGSKDRT--VSVWDV--NSRFILYKLYGHSGSVLCLDFCRRRNLLVSGS 280
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSA 691
+S S D TA +W + + CM RGH + + S+
Sbjct: 317 ISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSS 357
Score = 25.4 bits (53), Expect = 8.6
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
VSGS D T I+W W R + Y GH + L V N S S
Sbjct: 277 VSGSSDSTIIIWDWQNRRP----LKVYFGHTDNV--LGVVVSENYIISSS 320
>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 29.5 bits (63), Expect = 0.53
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 679 QTFNSLVVTTVSDHTVNRISRYIPY 605
Q+ +++VTT + T N +S+Y+PY
Sbjct: 79 QSIENMIVTTKAGQTENALSKYLPY 103
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.1 bits (62), Expect = 0.70
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 647 YRGHDKGIECLSVSADGNRFASGS 718
Y GH + I C++++ DG R +GS
Sbjct: 364 YTGHQEPILCMAITPDGKRVVTGS 387
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 28.7 bits (61), Expect = 0.92
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
+SGS D + +W V + + T++GH + I LS S DG F S S+
Sbjct: 283 LSGSMDNQ--IKIWEVYHDR-SLLRTFQGHARPIRDLSFSQDGRSFLSTSF 330
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 638 MITYRGHDKGIECLS-VSADGNRFASGS 718
+ T++GH KGI CL G+ SGS
Sbjct: 259 IFTWKGHTKGISCLRFFPISGHLLLSGS 286
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 28.7 bits (61), Expect = 0.92
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 685
D +G+ D T LW N+ N C+ + GH + +++
Sbjct: 375 DGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVAL 418
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 530 VSWVSFQGDQATFV--SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNR 703
+S + F Q T+V SG+ D LW N R+ M + GH I L+ G+
Sbjct: 148 ISALCFGKHQNTWVLASGADDSRVRLWDLNSSRS----MAVFEGHSSVIRGLTFEPTGSF 203
Query: 704 FASGS 718
SGS
Sbjct: 204 LLSGS 208
Score = 26.2 bits (55), Expect = 4.9
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
V+ + D S S D+T LW ++ + + RGH +G+ S + + A
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLW----DSSTGEVVGVLRGHRRGVWACSFNPFSRQLA 523
Query: 710 SGS 718
SGS
Sbjct: 524 SGS 526
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 644 TYRGHDKGIECLSVSADGNRFASGS 718
T + HD+ + + VS DG AS S
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASAS 484
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 429 SWILSGSYDNSLHIWSTKGQHKL-AIPGIH 515
S++LSGS D ++ +W+ K + + IP H
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFH 231
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 393 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI 503
H D+V H WILS S D ++ IW+ + ++ +AI
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAI 132
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 542 SFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+F + +S S DQT +W W S +C+ GH + C + + S S
Sbjct: 102 TFHHEYPWILSCSDDQTIRIWNW----QSRNCIAILTGHSHYVMCAAFHPSEDLIVSAS 156
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 635 CMITYRGHDKGIECLSVSADGNRFASG 715
C + GH + CLSV GN ASG
Sbjct: 371 CTNVFIGHKGRVRCLSVHVSGNWLASG 397
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 423 HSSWILSGSYDNSLHIWSTKGQHKLAIPG 509
+S ++ +GS D ++++WS G + +PG
Sbjct: 280 NSRFVGAGSSDKNVYVWSATGDLRYVLPG 308
Score = 27.1 bits (57), Expect = 2.8
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 518 PVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADG 697
P+ AV+ ++ QG Q F+ G + +W++ N C +GH I L++S DG
Sbjct: 179 PLTAVA-IAQQGTQV-FIGGID---GAIKIWDLRNNH--CSHVLKGHKDIITSLAISKDG 231
Query: 698 NRFASGS 718
+ S S
Sbjct: 232 SSLLSNS 238
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 318 VSTEDTLEVEYLERFPAPTPQDCLMHDDWV-SAVQAHSSWILSGSYDNSLHIWSTK 482
+S D V+ + D H+D+V +A ++ ++SG YD ++ +W T+
Sbjct: 140 LSGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTR 195
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 426 SSWILSGSYDNSLHIWSTKGQHKLAI 503
+SW + S+DNS+ +W G++K I
Sbjct: 354 ASWNIYNSFDNSMVLWCPYGKNKTLI 379
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 656 HDKGIECLSVSADGNRFASGSW 721
H KG+ C+S N F SGSW
Sbjct: 94 HGKGVSCISKLRLENCFISGSW 115
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V+GS D T LW + + T H K + LS+ D FASGS
Sbjct: 305 VTGSMDSTIRLWDLAAGKT----LTTLTHHKKTVRALSLHPDEFTFASGS 350
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +3
Query: 393 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPG 509
H WV V + W +G+ D ++ IW G KL + G
Sbjct: 162 HLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTG 203
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 632 DCMITYRGHDKGIECLSVSADGNRFASGS 718
+C GH+ ++C++ S +GN A+ S
Sbjct: 369 ECTAALEGHENEVKCIAWSCNGNYLATCS 397
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +3
Query: 381 DCLM----HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKG 485
DCL H V V H + ++SGSYDNS+ W G
Sbjct: 414 DCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDG 454
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 402 WVSAVQAHSSWILSGSYDNSLHIWSTK 482
W + S+ ++SG+ DN++ +W K
Sbjct: 56 WTCDINKSSTLMVSGAADNTMRLWDVK 82
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIW 473
H D V V I+S SYD +L +W
Sbjct: 576 HTDSVREVACLGDLIVSASYDGTLRVW 602
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 656 HDKGIECLSVSADGNRFASGS 718
HD I CL +S G++ AS S
Sbjct: 174 HDSEISCLGISKTGSKIASSS 194
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 408 SAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPG 509
SA +S I++GS+D++ +W+ GQ K + G
Sbjct: 103 SASALNSETIITGSWDSTARVWAL-GQCKYVLKG 135
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIW 473
H V A+ ++++SGS+D+S+ +W
Sbjct: 659 HHSEVWALAVGPTFVVSGSHDHSIRLW 685
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 740 KTNIVIPSSHLQNGYRQPTQTDIQFPCRD 654
+T + +P+ + NG + T TDI C D
Sbjct: 565 ETPVPVPNGNWYNGVKHETATDIFTTCHD 593
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 257 FLSMWRVTLCLPRRALTRKRGID 325
F+ + T+C P R LT RG+D
Sbjct: 450 FIQVANETMCRPIRKLTESRGLD 472
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCM 640
D+ V+GS D T LW+ N+P NSV +
Sbjct: 115 DRRIVVTGSWDGTIKLWLGNLP-NSVQTL 142
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Frame = +3
Query: 333 TLEVEYLERFPAPTPQDCL----MHDDWVSAVQ----AHSSWILSGSYDNSLHIWS 476
T + R P C+ +H ++V V SWI S +D SL+IW+
Sbjct: 251 TASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDWSDFGDGSWIASVGWDESLYIWN 306
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 429 SWILSGSYDNSLHIWSTKGQHKLAIPGIHHQ 521
SW+ +G+ +L+IWS K + H+Q
Sbjct: 89 SWLAAGTEKGNLYIWSLKSGALIYFFRAHYQ 119
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 25.4 bits (53), Expect = 8.6
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 198 LNQRNFEGDLTIVREGGNIDFLVCGEL-LCASLAEHLQEKGVSTEDT--LEVEYLERFPA 368
+N+ +EG + I + + +F V G+ L A+ E ++ + L VE +++P
Sbjct: 232 INKAGYEGKIKIGLDVASSEFYVDGKYDLDIKAAKPKPENKLTYQQLTDLYVELSKKYPI 291
Query: 369 PTPQDCLMHDDW 404
+ +D DDW
Sbjct: 292 VSIEDPFDQDDW 303
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWV--WNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWG 724
D+ TF++ S D T LW N P + + Y GH I C++V + SG G
Sbjct: 2306 DERTFLTASLDLTLRLWTLSTNKPIKASLKRVLY-GHRYRITCVTVCKAFSIIVSGDAG 2363
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 724 SPAPTCKTVTVSRHRQTFNSLVVT 653
SPAP T +S H T SLV++
Sbjct: 365 SPAPYSPTSVISNHSSTGKSLVIS 388
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 414 VQAHSSWILSGSYDNSLHIWSTKGQH 491
V +H+ +GS + S+ IW T GQ+
Sbjct: 1229 VHSHAPVYATGSSNQSIKIWDTLGQN 1254
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 276 LLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQA-HSSWILS 443
LL + L+E+G +T DT + L R +C+ D + VQ+ W+L+
Sbjct: 343 LLLNEIQPELEEQGYTTLDTQKYRVLSRQNGVVRSNCMDCLDRTNVVQSCIGRWVLT 399
>SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 274 SPHTKKSILPPSRTMV 227
SPHTK ++ PPS MV
Sbjct: 121 SPHTKLAVRPPSPKMV 136
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,135,205
Number of Sequences: 5004
Number of extensions: 65171
Number of successful extensions: 350
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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