Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00971
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 43 2e-04
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 43 2e-04
SB_46201| Best HMM Match : WD40 (HMM E-Value=0) 42 5e-04
SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10) 42 7e-04
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 38 0.009
SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25) 33 0.18
SB_19442| Best HMM Match : Beach (HMM E-Value=0) 33 0.32
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_32323| Best HMM Match : WD40 (HMM E-Value=0) 32 0.56
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 32 0.56
SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13) 32 0.56
SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_34358| Best HMM Match : DUF1280 (HMM E-Value=7) 31 0.75
SB_17431| Best HMM Match : RVT_1 (HMM E-Value=1.8e-25) 31 0.75
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_39595| Best HMM Match : WD40 (HMM E-Value=1.10001e-40) 31 0.99
SB_54813| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_38417| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 30 1.7
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 30 1.7
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 30 2.3
SB_35846| Best HMM Match : Baculo_p24 (HMM E-Value=1.6) 29 3.0
SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45) 29 3.0
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 29 3.0
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10) 29 4.0
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 29 5.3
SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15) 29 5.3
SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_9416| Best HMM Match : WD40 (HMM E-Value=0) 29 5.3
SB_59126| Best HMM Match : zf-A20 (HMM E-Value=4.4) 29 5.3
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 29 5.3
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_14261| Best HMM Match : ig (HMM E-Value=0) 29 5.3
SB_42943| Best HMM Match : WD40 (HMM E-Value=0) 28 7.0
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12) 28 9.2
SB_16540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_53604| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21) 28 9.2
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 243
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNR 703
+ +S V F D VSGS D+T + VW++ R ++T GH + CL++ +GNR
Sbjct: 27 QGISCVQF--DDTRIVSGSSDKT--IKVWDLSREDTSAVLTLAGHSGTVRCLNL--NGNR 80
Query: 704 FASGS 718
SGS
Sbjct: 81 LVSGS 85
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 542 SFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
S + D VSGS+D+T L VW++ + +C +T RGH+ + C V D ++ SGS+
Sbjct: 89 SIKVDDEKVVSGSYDKT--LKVWDI--KTGNCKLTLRGHNAAVLC--VQFDESKIVSGSY 142
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 605 VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
VW++ S C++T GH + CL+++ D + SGS
Sbjct: 194 VWSLVEGS--CLMTLAGHHDAVTCLNLTLDRRKVISGS 229
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 411 AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPG 509
+++ ++SGSYD +L +W K G KL + G
Sbjct: 89 SIKVDDEKVVSGSYDKTLKVWDIKTGNCKLTLRG 122
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNR 703
+ +S V F D VSGS D+T + VW++ R ++T GH + CL++ +GNR
Sbjct: 654 QGISCVQF--DDTRIVSGSSDKT--IKVWDLSREDTSAVLTLAGHSGTVRCLNL--NGNR 707
Query: 704 FASGS 718
SGS
Sbjct: 708 LVSGS 712
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 542 SFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
S + D VSGS+D+T L VW++ + +C +T RGH+ + C V D ++ SGS+
Sbjct: 716 SIKVDDEKVVSGSYDKT--LKVWDI--KTGNCKLTLRGHNAAVLC--VQFDESKIVSGSY 769
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 605 VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
VW++ S C++T GH + CL+++ D + SGS
Sbjct: 821 VWSLVEGS--CLMTLAGHHDAVTCLNLTLDRRKVISGS 856
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 411 AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPG 509
+++ ++SGSYD +L +W K G KL + G
Sbjct: 716 SIKVDDEKVVSGSYDKTLKVWDIKTGNCKLTLRG 749
>SB_46201| Best HMM Match : WD40 (HMM E-Value=0)
Length = 292
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 533 SWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFAS 712
+++ + V+GS D TA W NS +CM T++GH+ I CL+V G +
Sbjct: 159 TYIDLDNNDDILVTGSADNTAKAW----GMNSNECMNTFKGHEGAILCLAVDGKGRLLFT 214
Query: 713 GS 718
GS
Sbjct: 215 GS 216
>SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10)
Length = 345
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 611 NVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
N+P V+ + Y GHD I CL VS DG +GSW
Sbjct: 287 NLPTFQVERLAVYYGHDNRISCLKVSPDGTGICTGSW 323
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNR 703
K V + D VSGS D+ +L VW++ S DC ++ +GH I+CL+ DG R
Sbjct: 380 KPVLCLQIINDGQAIVSGSEDK--VLRVWDLV--SRDC-VSLKGHGGLIKCLAAMHDGKR 434
Query: 704 FASGS 718
SG+
Sbjct: 435 IVSGA 439
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+SGS D T W N C + ++GH K + CL + DG SGS
Sbjct: 353 ISGSDDSTVRAWDLE---NGESCAV-FQGHSKPVLCLQIINDGQAIVSGS 398
Score = 34.7 bits (76), Expect = 0.080
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNR 703
K V+ + D VSGS D T LW +C +GH + CLSV+++
Sbjct: 675 KGVTALLIMNDCRHLVSGSKDSTIRLW----DLTKGECKQVMQGHTNEVLCLSVTSNDKT 730
Query: 704 FASGS 718
SGS
Sbjct: 731 IVSGS 735
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
++ D + VS S D +L VW S C T GH I C++++ DG SGS
Sbjct: 468 IAVSRDDSVIVSASKDD--LLKVWRT--ESWVCTQTLIGHSSWISCVAMTTDGKTIISGS 523
Score = 31.5 bits (68), Expect = 0.75
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +2
Query: 527 AVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRF 706
AV+ D VSGS D T L +V R+ D M+ RGHDKG+ L + D
Sbjct: 634 AVTCAQVTQDGTQVVSGSADGTVRLH--SVLRDR-DGMVL-RGHDKGVTALLIMNDCRHL 689
Query: 707 ASGS 718
SGS
Sbjct: 690 VSGS 693
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +3
Query: 321 STEDTLEVEYLERFPAPTPQDCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWSTKGQ-H 491
S +D L+V E + Q + H W+S A+ I+SGS D ++ +W T G H
Sbjct: 481 SKDDLLKVWRTESWVCT--QTLIGHSSWISCVAMTTDGKTIISGSNDKNVKMWYTHGNAH 538
Query: 492 KLAI 503
AI
Sbjct: 539 AQAI 542
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
D VSG+ D + VW++ R ++C T +GH I ++VS D + S S
Sbjct: 431 DGKRIVSGAKDNN--IKVWDLVR--LECQATLKGHTSLIWAIAVSRDDSVIVSAS 481
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 527 AVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRF 706
+VS V+ V+GS D LW + +C +T HD + C V+ DG +
Sbjct: 593 SVSCVTRVATSPKVVTGSSDGEMKLW----DCVTGEC-VTIARHDGAVTCAQVTQDGTQV 647
Query: 707 ASGS 718
SGS
Sbjct: 648 VSGS 651
>SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSA 691
D+ T VSGSHD T + VW++ + +C++ +GH+ + CL A
Sbjct: 611 DENTLVSGSHDST--IRVWDM--RTWECVLVLQGHEGAVSCLEFDA 652
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +2
Query: 527 AVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 694
AVS + F D +SGS D+T LW NV S DC+ T RGH + + V+ D
Sbjct: 644 AVSCLEF--DAPFVLSGSADKTIKLW--NV--ESGDCLNTLRGHADAVTSVKVTLD 693
>SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25)
Length = 389
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = -2
Query: 700 VTVSRHRQTFNSLVVTTVSDHTVNRISRYIPYPEYCCLIMRSTNKCSLIAL-----EGNP 536
V V+R R T+ S+ T+S T+ +SR+I Y C ++ L L G P
Sbjct: 184 VRVTRKRITYQSIGFHTISTWTIRGVSRWISYLTRCFTVLYEVFHNILYGLFYSITRGEP 243
Query: 535 *YCFYW*CMP 506
Y YW P
Sbjct: 244 AYHSYWTMSP 253
>SB_19442| Best HMM Match : Beach (HMM E-Value=0)
Length = 796
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Frame = +2
Query: 551 GDQATFVSGSHDQTAILWVWN-------VPRNSV----DCMITYRGHDKGIECLSVSADG 697
G A VSGS D T ++W W+ NSV + GH++ I C+ V+A
Sbjct: 441 GGDAIVVSGSRDATVLVWHWSERIQRVTAASNSVGGDPSPLAILTGHEQPITCVDVNAAL 500
Query: 698 NRFASGSWG 724
SGS G
Sbjct: 501 GLVVSGSQG 509
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITY-RGHDKGIECLSVSADGN 700
+ V ++F D SG D + VW + C+ + R H KG+ C++ S D +
Sbjct: 265 ETVLCLTFSRDSEMLASGGQDGK--IKVWKLQTGQ--CLRRFERAHSKGVTCVTFSRDAS 320
Query: 701 RFASGSW 721
+ SGS+
Sbjct: 321 QLLSGSF 327
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V F GD + ++ S D++ L VW V R + + H + C S DG SGS
Sbjct: 34 VDFSGDGQSLLTASDDKS--LKVWTVHRQKF--LYSLNAHMNWVRCAKFSPDGRLIVSGS 89
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 530 VSWV---SFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 700
++WV F D VSGS D+T LW R S DC+ T+ + + G
Sbjct: 70 MNWVRCAKFSPDGRLIVSGSDDKTIKLW----DRTSKDCVHTFYDPGGFVNSVEFHPSGT 125
Query: 701 RFASG 715
A+G
Sbjct: 126 CIAAG 130
>SB_32323| Best HMM Match : WD40 (HMM E-Value=0)
Length = 611
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRN-SVDCMITYRGHDKGIEC 676
+ V+WV+F VSG+ D+ LW N + VD T RGH + C
Sbjct: 208 RGVNWVAFHPTMPLIVSGADDRQVKLWRMNDSKAWEVD---TCRGHYNNVSC 256
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+S + +FVSG+ D +A LW C+ T+ GH+ I ++ G F +GS
Sbjct: 119 LSLNPNNQSFVSGACDASAKLW----DIRGGTCVQTFTGHESDINAVAFFPSGFAFGTGS 174
>SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13)
Length = 232
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 563 TFVSGSHDQTAILWVWNVPR----NSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+F ++D A++ N R ++DC + GH K I CL V ADG + +GS
Sbjct: 141 SFAGKTNDHLAVVTNSNQLRLYNLETLDCRMV-EGHSKMILCLDVCADGTKIVTGS 195
>SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1808
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 231 IVREGGNIDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVS 410
+ R+ G +D+++ S AE L + G S + V+ L P+ L D S
Sbjct: 1092 LTRDTGTLDWMLTNRPKMWSPAEQLPKPGRSDHYCVLVKPLIVQSKPSKSSVLSRDLRES 1151
Query: 411 AVQAHSSWILSGSYDNSLHI 470
AV A WI + ++D+ L +
Sbjct: 1152 AVTAFGRWITAFNWDHVLEL 1171
>SB_34358| Best HMM Match : DUF1280 (HMM E-Value=7)
Length = 359
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/110 (21%), Positives = 44/110 (40%)
Frame = +3
Query: 237 REGGNIDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAV 416
R+ G +D+ + C S L + G S VE PT D S +
Sbjct: 68 RDTGTLDWCFTNKSKCLSTPIQLPKLGTSDHYCFLVENNRPRIKPTKTVVTKRDTRASCI 127
Query: 417 QAHSSWILSGSYDNSLHIWSTKGQHKLAIPGIHHQ*KQYHGFPSRAIKLH 566
++ WI S S+D ++ S + + + I ++ P R++++H
Sbjct: 128 RSFGQWITSYSWDELYNLTSCREKFEWFYRKIMEAIDKF--LPMRSVRMH 175
>SB_17431| Best HMM Match : RVT_1 (HMM E-Value=1.8e-25)
Length = 867
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/110 (21%), Positives = 44/110 (40%)
Frame = +3
Query: 237 REGGNIDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAV 416
R+ G +D+ + C S L + G S VE PT D S +
Sbjct: 303 RDTGTLDWCFTNKSKCLSTPIQLPKLGTSDHYCFLVENNRPRIKPTKTVVTKRDTRASCI 362
Query: 417 QAHSSWILSGSYDNSLHIWSTKGQHKLAIPGIHHQ*KQYHGFPSRAIKLH 566
++ WI S S+D ++ S + + + I ++ P R++++H
Sbjct: 363 RSFGQWITSYSWDELYNLTSCREKFEWFYRKIMEAIDKF--LPMRSVRMH 410
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 31.1 bits (67), Expect = 0.99
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
V ++ D VS S D+T L +WN+ + + T RGH + + C+ S D
Sbjct: 835 VRGIAITSDGRRLVSASQDRT--LRIWNL--ETFAHVSTLRGHSETVYCVCCSPDDKFAI 890
Query: 710 SGS 718
SGS
Sbjct: 891 SGS 893
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPR--NSVDCMITYRGHDKGIECLSVSADGNR 703
VS V D +S S+D+T +W NS+D GHD + +++++DG R
Sbjct: 793 VSGVLVTPDSKRIISSSYDKTVKIWDVETCAFVNSLD------GHDGHVRGIAITSDGRR 846
Query: 704 FASGS 718
S S
Sbjct: 847 LVSAS 851
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 393 HDDWVSAVQA--HSSWILSGSYDNSLHIWSTK 482
H +WVS V S I+S SYD ++ IW +
Sbjct: 789 HKNWVSGVLVTPDSKRIISSSYDKTVKIWDVE 820
>SB_39595| Best HMM Match : WD40 (HMM E-Value=1.10001e-40)
Length = 260
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 551 GDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
G T +SGS D+TA +W+ P+ C++T GHD + + + D +GS
Sbjct: 116 GKFGTLLSGSWDKTAKVWLG--PK----CVMTLEGHDAAVWAVLLMPDHGLMLTGS 165
>SB_54813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 273 ELLCASLAEHLQE--KGVSTEDTLEVEYLERFPAPTPQDCLMHDDW 404
+L+C S L E S+EDT+ V +L+ P P+ C+ ++W
Sbjct: 337 DLICLSTDSELSEAMSHQSSEDTVRV-FLKTADTPAPEQCISPEEW 381
>SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1845
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 632 DCMITYRGHDKGIECLSVSADGNRFASGS 718
+C+ Y GH + CL +S D R +GS
Sbjct: 1358 NCVKVYDGHHNAVNCLEISEDRTRLFTGS 1386
>SB_38417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/110 (21%), Positives = 44/110 (40%)
Frame = +3
Query: 237 REGGNIDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAV 416
R+ G +D+ + C S L + G S VE PT D S +
Sbjct: 303 RDTGTLDWCFTNKSKCLSTPIQLPKLGTSDHYCFLVENNRPRIKPTKTVVTKRDTRASCI 362
Query: 417 QAHSSWILSGSYDNSLHIWSTKGQHKLAIPGIHHQ*KQYHGFPSRAIKLH 566
++ WI S S+D ++ S + + + I ++ P R++++H
Sbjct: 363 RSFGQWITSYSWDELHNLTSCREKFEWFYRKIMEAIDKF--LPMRSVRMH 410
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 527 AVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRF 706
+V+ F D A V+ SHD+T LW +S + + Y GH I + +
Sbjct: 41 SVNSCRFCFDDAKIVTASHDKTIRLW----DASSGNQLKVYTGHTSIITSCHPNTTSRKL 96
Query: 707 ASGSW 721
SG W
Sbjct: 97 ISGGW 101
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 551 GDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVS-ADGNRFASGSW 721
GD + S S D+T +L W+V V + YRGH + C+ + D SGS+
Sbjct: 623 GDSSRIASCSADRTVVL--WDVSTGQV--IRRYRGHTSRVNCVKFNQPDSTVIISGSY 676
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNR 703
K V F D SGS D T + VW+ ++ + GH + C+ VS DG
Sbjct: 1182 KGVLTTCFSIDDRKIFSGSEDCT--IRVWDSKTGALLAQLD--GHAGAVTCVRVSPDGGV 1237
Query: 704 FASGS 718
AS S
Sbjct: 1238 IASSS 1242
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKLAIPGIHHQ 521
H DWV V S L SGS D ++ +W KL H +
Sbjct: 1457 HSDWVMDVAFSSDGALLTSGSRDRTVRVWDCAAAEKLKKARFHSE 1501
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 572 SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
S ++D T LW N ++ +IT GH++ + L+ SADG + A+ S
Sbjct: 128 SAAYDLTVKLWDINAAKS----VITLEGHNEQVFSLAWSADGKQLATFS 172
>SB_35846| Best HMM Match : Baculo_p24 (HMM E-Value=1.6)
Length = 810
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 697 TVSRHRQTFNSLVVTTVSDHTVNRISRY-IPYPEYCCLIMRSTNKCSL 557
T+S H+ T SLV T +D T+ +S + C + T C+L
Sbjct: 147 TISPHKTTLRSLVCTLTADTTLGTLSSHKTTLRSLVCTLTAGTTLCTL 194
>SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)
Length = 2022
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 345 EYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKG 485
+ LE A TP D L + W S+ A W ++ +Y S + S G
Sbjct: 1582 QVLEELIAETPSDLLSRELWCSSTGALEWWHMTKTYARSTAVMSMIG 1628
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECL 679
VS+ D SGS D+TA ++V + R ++D + Y+GH++ ++ L
Sbjct: 39 VSWSCDGRRLASGSFDRTASVFVLDKDRLTLDHI--YKGHNESVDQL 83
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 566 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
F +GS D A++ +W++ + + C+ T+ D + LS S DG ASGS
Sbjct: 248 FATGSAD--ALVSLWDL--DELVCVRTFSRLDWPVRTLSFSHDGRMLASGS 294
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 572 SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
S S+D T LW +V R C+ H + + +S S DG ASGS+
Sbjct: 308 SASYDTTVRLW--DVERGG--CLQVLSKHHEPVYTISFSPDGRYLASGSF 353
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 432 WILSGSYDNSLHIWSTK 482
++ SGS+D +HIWST+
Sbjct: 347 YLASGSFDKRVHIWSTQ 363
>SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10)
Length = 193
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 690 LTVTVLQVGAGDNNVCLW 743
LTV V Q+ G+NN+CLW
Sbjct: 141 LTVVVPQLRRGENNLCLW 158
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -2
Query: 721 PAPTCKTVTVSRHRQTF--NSLVVTTVSDHTVNRISRYIPYPEYCCLIMRSTNK 566
PAP T T++ HR NS+++++ T RY +P CC + +S+NK
Sbjct: 1066 PAPIT-TTTITNHRLNCHTNSVILSSRKRPTY----RYNSHPLVCCTLWKSSNK 1114
>SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15)
Length = 1224
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 172 LHWIA*GLSGTAYCSCLVINLTCN*ASKASPDILYFN 62
LH + G G Y CL I+LTC S + Y N
Sbjct: 727 LHSFSQGGGGAIYAECLKIHLTCQNVSVVNSSTAYAN 763
>SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
VS V Q ++GSHD T LW +++V T H K I ++++ + FA
Sbjct: 406 VSSVRAQAVDPQVITGSHDCTIRLWDLAAGKSAV----TLTNHKKSIRAVTLNPNLFTFA 461
Query: 710 SGS 718
S S
Sbjct: 462 SAS 464
>SB_9416| Best HMM Match : WD40 (HMM E-Value=0)
Length = 700
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+SGS ++ IL VW+ PR S + ++ +GH ++ + + +DG + SGS
Sbjct: 185 ISGSTEK--ILRVWD-PR-SCEKVMKLKGHMDNVKAVVIDSDGQQCLSGS 230
>SB_59126| Best HMM Match : zf-A20 (HMM E-Value=4.4)
Length = 860
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 550 GRSSYIC*WIS*SNSNTLGMECT*KFC*LYDHLPWSRQGN*MSV-CVG 690
GR C W+S +NT G C +C + HL R+G+ + V C G
Sbjct: 2 GRGKDYCEWLSIGRANTCGRRCLDTYCKV--HLQRLRKGSPLPVPCRG 47
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 411 AVQAHSSWILSGSYDNSLHIWS 476
A+ S+I+SGS DN++ +WS
Sbjct: 232 AIYPFGSYIMSGSSDNTIRVWS 253
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 644 TYRGHDKGIECLSVSADGNRFASGS 718
T GH KG+ L+V+ADG+ SGS
Sbjct: 1054 TLVGHSKGVYGLAVTADGSCVVSGS 1078
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +3
Query: 270 GELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGS 449
G + + L+ H+ G ST+ TL+V E H V + H ++SGS
Sbjct: 360 GGVWSSQLSGHIIVSG-STDRTLKVWNAET--GYCMHTLYGHTSTVRCMDMHEEVVVSGS 416
Query: 450 YDNSLHIWST 479
D +L +W T
Sbjct: 417 RDGTLRVWDT 426
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 393 HDDWV-SAVQAHSSWILSGSYDNSLHIWS 476
HDD V + +Q S ++SGS D +L +WS
Sbjct: 317 HDDHVITCLQFSGSRVVSGSDDGTLKVWS 345
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 345 EYLERFPAPTPQDCLM----HDDWVSAVQAHSSWILSGSYDNSLHIW 473
++L + P + C+ H + V ++Q ++I+SGS D S+ +W
Sbjct: 458 DFLVKVWDPETEQCIHTLQGHTNRVYSLQFDGTYIVSGSLDTSIRVW 504
>SB_14261| Best HMM Match : ig (HMM E-Value=0)
Length = 1337
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +1
Query: 151 VLTLSSVTSHPADLNTLINAILKETSPSFEKAVILIS*YVESYFVPPSQSTYKKKGYRQR 330
+ T+ S + A N I P+ E + + E+ VPP K GYR
Sbjct: 854 IYTVVSSSDKAATTNGSIRIAYMSFPPTEENKTNINKLFNET--VPPCTGNVKVYGYRGS 911
Query: 331 TRLRSNTWKGSLHQL 375
R R+ ++G H+L
Sbjct: 912 DRCRNRPYRGRRHRL 926
>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
Length = 273
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
VS V D +SGS D+T LW N + + GH K + ++ SAD +
Sbjct: 103 VSDVVMSSDGQFALSGSWDKTLRLWDLNAGVTTR----RFVGHTKDVLSVAFSADNRQIV 158
Query: 710 SGS 718
SG+
Sbjct: 159 SGA 161
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 563 TFVSGSHDQTAILWVWNVPRNSVDCMITYR---GHDKGIECLSVSADGNRFASGSW 721
T +S S D+ I VW + R+ + + GH+ + + +S+DG SGSW
Sbjct: 67 TILSSSRDKKLI--VWELTRDDANYGFAKKSLTGHNHFVSDVVMSSDGQFALSGSW 120
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 518 PVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVP 619
P V +VSF D + + + LW+W++P
Sbjct: 669 PKLGVGYVSFSADSRYMATKNDNMPNALWIWDMP 702
>SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12)
Length = 849
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 12/113 (10%)
Frame = +3
Query: 108 VRFITKQEQYAVPDSPYAIQCNVTPCGP*Y-LNQRNFEGDLTIVR--EGGNIDF------ 260
++ T +E + P + C TPCG L+ N +T++R +G D+
Sbjct: 570 IQLKTLEESFLHPQGLDGLSCISTPCGQALVLDPNNVNRRVTLIRIPDGKYDDYEEDIKW 629
Query: 261 ---LVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVS 410
L LC++L EH S+ + E E + + + C++ D VS
Sbjct: 630 YCTLERLSCLCSTLTEHRSYNPSSSVECFEGEVSRTASSNSNEHCVVDPDIVS 682
>SB_16540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 264 VCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQD 383
+C C+ ++L+EKG++ D E++ P TPQ+
Sbjct: 103 ICDFDSCSCGTDNLKEKGINETDKTEIKKGRMVPLLTPQN 142
>SB_53604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 423 HSSWILSGSYDNSLHIWSTKGQ 488
+++WI +G +D + +WS GQ
Sbjct: 401 NNTWIFTGGFDKVVKVWSQDGQ 422
>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
Length = 123
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 563 TFVSGSHDQTAILWVWNVPRNSVDCMITYR---GHDKGIECLSVSADGNRFASGSW 721
T +S S D+ I VW + R+ + + GH+ + + +S+DG SGSW
Sbjct: 30 TILSSSRDKKLI--VWELTRDDANYGFAKKSLTGHNHFVSDVVMSSDGQFALSGSW 83
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
D V GS + +W + ++ + + + HD + +SV + +R S SW
Sbjct: 52 DSKRIVVGSDNGAVDIWSQSGSLLGLENLASLKEHDNVVSSVSVDCEKSRIISASW 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,041,280
Number of Sequences: 59808
Number of extensions: 509935
Number of successful extensions: 1455
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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