Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00971
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.5  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   4.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.3  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   5.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.7  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   5.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +3

Query: 420 AHSSWILS-GSYDNSLHIWSTKGQHKLAIPGIHHQ*KQYHGFP 545
           AH S  LS G    ++   S  G H LA P  HH     HG P
Sbjct: 688 AHGSLNLSAGGSPVAVVSSSPTGGHHLASPSPHHHLTSPHGAP 730


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 363 GTFPSIRPQACPLSIPLFLVSAL 295
           G  P+I P A P S  + L SAL
Sbjct: 214 GKIPNILPSALPASTTMVLASAL 236


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = -3

Query: 465  VSYCHNFLIESNYCVPEQLTPNRRALNSPVELVQGTFPSIRPQACPLSIPLFLVSALRGR 286
            V+Y ++  +E    +PE+     R + +P E  QG F  +  +  P  I  F +    G 
Sbjct: 851  VAYLYHIRMELICPIPEEQNTRGRKIYAPEESAQG-FGILTTKLIP-KISSFPIFTRSGE 908

Query: 285  HKVTLHI 265
             KV+L +
Sbjct: 909  VKVSLDL 915


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 198 LNQRNFEGDLTIVREGGNIDFLVCGE 275
           LNQ N+E DL ++  GG    L C +
Sbjct: 4   LNQENYEYDLVVI--GGGSGGLACAK 27


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 257 FLSMWRVTLCLPRRALTRKRGID 325
           F+ +    +C P RALT+ RG D
Sbjct: 472 FVRVANEAMCRPIRALTQARGYD 494


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 316 GYRQRTRLRSNTW 354
           G+  +TR RSNTW
Sbjct: 50  GFEPQTRARSNTW 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,148
Number of Sequences: 2352
Number of extensions: 18281
Number of successful extensions: 83
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)