Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00971
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 57 2e-08
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 41 0.001
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 38 0.006
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 38 0.008
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 35 0.070
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 35 0.070
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 35 0.070
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 35 0.070
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 31 0.65
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.65
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 31 0.65
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 31 1.1
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 30 1.5
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 30 2.0
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 29 3.5
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 29 3.5
Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical p... 29 4.6
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 29 4.6
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 6.1
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 6.1
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 56.8 bits (131), Expect = 2e-08
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Frame = +3
Query: 93 EAQLQVRFITKQEQYA-VPDSPYAIQCNVTPCGP*YLNQRNFEGDLTIVREGGNIDFLVC 269
+ +Q+ F +K E+ +PD+ + + L + E + +E +FLV
Sbjct: 18 QKHVQITFFSKDEEIPQIPDAVFDVPTGAECDDMNLLLNKTIEANDGAWKER-RFEFLVG 76
Query: 270 GELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGS 449
L SLAE ++E V TE L+VE + AP P + DWVS+VQ + I S +
Sbjct: 77 ETFLRTSLAEFIEEYEVETETILKVECVIGIEAPKPLHDIQAPDWVSSVQIANGHIFSTT 136
Query: 450 YDNSLHIWSTKGQH-KLAI 503
Y + I KG+ KLA+
Sbjct: 137 YGGDIVIVDRKGKETKLAV 155
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 548 QGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
Q D FV G +Q +L ++ + + ++ + RGH++ +EC+SV++D R SGS
Sbjct: 176 QLDGTEFVVGGENQ--LLTLYAIEKGALVEKLILRGHERAVECVSVNSDSTRAISGS 230
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2
Query: 521 VKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIEC 676
V+AV W +Q FVS S D+TA + W+V R+S + GHD I C
Sbjct: 370 VEAVKWNPLDTNQ--FVSVSTDKTAKM--WDV-RSSKSSLFDIHGHDDRILC 416
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+S D TF+SG+ D +A LW ++ R+ + C T+ GH+ I ++ GNRFA+GS
Sbjct: 190 LSLSPDFRTFISGACDASAKLW--DI-RDGM-CKQTFPGHESDINAVAFFPSGNRFATGS 245
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 653 GHDKGIECLSVSADGNRFASGSW 721
GHD + CL V+ DG +GSW
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSW 332
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+S D TF+SG+ D +A LW ++ R+ + C T+ GH+ I ++ GN FA+GS
Sbjct: 190 LSLSPDFRTFISGACDASAKLW--DI-RDGM-CKQTFPGHESDINAVAFFPSGNAFATGS 245
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 653 GHDKGIECLSVSADGNRFASGSW 721
GHD + CL V+ DG +GSW
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSW 332
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
+S D TF+SG+ D +A LW ++ R+ + C T+ GH+ I ++ GN FA+GS
Sbjct: 190 LSLSPDFRTFISGACDASAKLW--DI-RDGM-CKQTFPGHESDINAVAFFPSGNAFATGS 245
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 653 GHDKGIECLSVSADGNRFASGSW 721
GHD + CL V+ DG +GSW
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSW 332
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
D FVSGS D+T L VW + C T GH+KG+ C+ G R SGS
Sbjct: 246 DPEMFVSGSLDKT--LKVWKLGEQESIC--TLEGHEKGVNCVEF-LTGGRIVSGS 295
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK 482
H + V+ V +WI+SG+ D+++ IW+++
Sbjct: 318 HKNNVTFVTPFKTWIISGAEDSTVKIWNSQ 347
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
VS V+F +S S D T + W++ C+ T+RGH+ + + +S DG FA
Sbjct: 194 VSSVTFLPTGDFVLSASRDHT--IKQWDISTGY--CVYTFRGHNDWVRMIRISNDGTLFA 249
Query: 710 SGS 718
S S
Sbjct: 250 SAS 252
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 34.7 bits (76), Expect = 0.070
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFAS 712
++ +FVS S D+T LW + + C TY+ H + + +++ AD N AS
Sbjct: 1119 NENSFVSASSDKTVKLWSIKPELDEIGCQWTYQKHTRPVHDITILAD-NSIAS 1170
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 34.7 bits (76), Expect = 0.070
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFAS 712
++ +FVS S D+T LW + + C TY+ H + + +++ AD N AS
Sbjct: 1119 NENSFVSASSDKTVKLWSIKPELDEIGCQWTYQKHTRPVHDITILAD-NSIAS 1170
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +2
Query: 530 VSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFA 709
VS V+F +S S D T + W++ C+ T+RGH+ + + +S DG FA
Sbjct: 194 VSSVTFLPTGDFVLSASRDHT--IKQWDISTGY--CVYTFRGHNDWVRMIRISNDGTLFA 249
Query: 710 SGS 718
S S
Sbjct: 250 SAS 252
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 542 SFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
+F + VSGS D++ + +W+V C+ T H + +S + DG+ ASGS+
Sbjct: 178 NFNPQSSLVVSGSFDES--VRIWDVKTGM--CIKTLPAHSDPVSAVSFNRDGSLIASGSY 233
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 393 HDDWVSAVQAH--SSWILSGSYDNSLHIWST 479
H D VSAV + S I SGSYD + IW T
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 318 VSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAH--SSWILSGSYDNSLHIWSTK 482
VS D ++ E + + H+++V + SS ++SGS+D S+ IW K
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical
protein R134.2 protein.
Length = 1118
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 391 CTTIGCQLFRHTVVGFY-QEVMTIAYIYGAQKDNTN 495
C+T+ C T++G Y +++ + Y+YG NTN
Sbjct: 352 CSTVECMTANTTIMGGYARQLFDVVYLYGVALTNTN 387
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 393 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPG 509
H WV AV + W SG D + IW GQ KL++ G
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTG 224
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
++ SHD T LW R+ C +T+ H K + L++ N FAS S
Sbjct: 326 ITASHDATVRLWDLAAGRSM--CTLTH--HKKSVRALTIHPRLNMFASAS 371
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 393 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPG 509
H WV AV + W SG D + IW GQ KL++ G
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTG 224
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
++ SHD T LW R+ C +T+ H K + L++ N FAS S
Sbjct: 326 ITASHDATVRLWDLAAGRSM--CTLTH--HKKSVRALTIHPRLNMFASAS 371
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 572 SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVS 688
S S DQTA +W S C+ TY GH + C+++S
Sbjct: 157 SASADQTARIW----SLESGACLATYTGHTGSVNCVAIS 191
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 572 SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVS 688
S S DQTA +W S C+ TY GH + C+++S
Sbjct: 155 SASADQTARIW----SLESGACLATYTGHTGSVNCVAIS 189
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 548 QGDQATFVSGSHDQTAILW----VWNVPRNSVDCMI-TYRGHDKGIECLSVSADGNRFAS 712
+ D+ T +S S D+T ++W V V + + + GH+ + + +S+DG S
Sbjct: 27 RNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALS 86
Query: 713 GSW 721
GSW
Sbjct: 87 GSW 89
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 411 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAI 503
A A + I+SGS D S+ +W+T Q K I
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQCKYTI 148
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 554 DQATFVSGSHDQTAILWVW--NVPRNSVDCMITYRGHDKGIECLSVSADGNR 703
D TF + S D+T +W + NVP T GH+KG+ C+ G +
Sbjct: 154 DNNTFATASLDKTVKVWQFGSNVPN------FTLEGHEKGVNCVDYYHGGEK 199
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 387 LMHDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQ 488
L D V V H +W+L+ Y+ ++HIW+ + Q
Sbjct: 12 LARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQ 47
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 393 HDDWVSAVQAHSSWILSGSYDNSLHIWS 476
H+ +S++ H + I+SGS+D ++ +W+
Sbjct: 487 HESAISSIDIHGNHIVSGSWDRTIKMWT 514
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 557 QATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
Q +SG+ +++ +++ S + T++GH + CL S D + F S S+
Sbjct: 879 QYILISGNQSDPGVIYAYHIA--SEQLIGTFKGHTAAVTCLCSSNDSSLFVSTSF 931
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 641 ITYRGHDKGIECLSVSADGNRFASG 715
I + GH K + C+ S+DG FA+G
Sbjct: 97 IMFSGHKKAVNCIEFSSDGLLFATG 121
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 528 QYHGFPSRAIKLHLLVDLMIKQQYSGYGMY 617
QY GFPS I +L+ L++K+ Y +G Y
Sbjct: 8 QYVGFPSAQITNLILLILIVKKAYKMFGQY 37
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 653 GHDKGIECLSVSADGNRFASGSW 721
GH+ I CL S DG S SW
Sbjct: 326 GHENRISCLRTSPDGTAVCSASW 348
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 653 GHDKGIECLSVSADGNRFASGSW 721
GH+ I CL S DG S SW
Sbjct: 326 GHENRISCLRTSPDGTAVCSASW 348
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 524 KAVSWVSFQGDQATFVSGSHDQTAILWVWN 613
+ V+WV+F VSGS D+ +W +N
Sbjct: 208 RGVNWVAFHHTNPILVSGSDDRQVKIWRYN 237
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 387 LMHDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI 503
L H D++ H WI+S S D ++ IW+ + ++ +AI
Sbjct: 92 LGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAI 132
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 393 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPG 509
H+ +V Q H + + S S D ++ +W G K +PG
Sbjct: 136 HNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQMPG 176
>Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical
protein F32H2.4 protein.
Length = 298
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +2
Query: 539 VSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
VS D G+ D + LW + C HD GI +S S +G ASGS
Sbjct: 182 VSISKDGRKLAVGASDASCSLW----DLEELICERVIPRHDYGIRAVSFSCNGQLLASGS 237
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 402 WVSAVQAHSSWILSGSYDNSLHIWST 479
W S + +I+SGS D ++ +WST
Sbjct: 298 WTSQISQCGRYIVSGSTDRTVKVWST 323
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 393 HDDWV-SAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPG 509
H+D V + +Q H +++GS DN+L +W KG+ + G
Sbjct: 252 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVG 292
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V+GS D T L VW + + V M T GH G+ +S G SGS
Sbjct: 268 VTGSDDNT--LKVWCIDKGEV--MYTLVGHTGGVWTSQISQCGRYIVSGS 313
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 402 WVSAVQAHSSWILSGSYDNSLHIWST 479
W S + +I+SGS D ++ +WST
Sbjct: 300 WTSQISQCGRYIVSGSTDRTVKVWST 325
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 393 HDDWV-SAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPG 509
H+D V + +Q H +++GS DN+L +W KG+ + G
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVG 294
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V+GS D T L VW + + V M T GH G+ +S G SGS
Sbjct: 270 VTGSDDNT--LKVWCIDKGEV--MYTLVGHTGGVWTSQISQCGRYIVSGS 315
>U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical
protein C26B2.4 protein.
Length = 371
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 459 YCHNFLIESNYCVPEQLTPNRRALNSPV-ELVQGTFP 352
YC N ESN C E+ R L+S V EL+Q T P
Sbjct: 130 YCENNYCESNMCREEENRLIDRMLSSTVHELIQKTSP 166
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 402 WVSAVQAHSSWILSGSYDNSLHIWST 479
W S + +I+SGS D ++ +WST
Sbjct: 300 WTSQISQCGRYIVSGSTDRTVKVWST 325
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 393 HDDWV-SAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPG 509
H+D V + +Q H +++GS DN+L +W KG+ + G
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVG 294
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +2
Query: 569 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGS 718
V+GS D T L VW + + V M T GH G+ +S G SGS
Sbjct: 270 VTGSDDNT--LKVWCIDKGEV--MYTLVGHTGGVWTSQISQCGRYIVSGS 315
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 542 SFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
S+ D VS S D+ ++ V++V +S C+ T +GH + C + G ASGS+
Sbjct: 155 SWSSDSKLIVSCSDDK--LVKVFDV--SSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSF 210
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 545 FQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSW 721
F SGS D+T +W RN + + + GH+ + + + DG ASGS+
Sbjct: 198 FNPSGTLIASGSFDETIRIWC---ARNG-NTIFSIPGHEDPVSSVCFNRDGAYLASGSY 252
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 342 VEYLERFPAPTPQDCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWS 476
+ Y + + + H + VS A+ + ++LSGS+D S+ +W+
Sbjct: 582 IRYFDNTNGSIIHEAIAHVEGVSSLAIDPNGLYLLSGSHDGSIRMWN 628
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 342 VEYLERFPAPTPQDCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWS 476
+ Y + + + H + VS A+ + ++LSGS+D S+ +W+
Sbjct: 582 IRYFDNTNGSIIHEAIAHVEGVSSLAIDPNGLYLLSGSHDGSIRMWN 628
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,492,715
Number of Sequences: 27780
Number of extensions: 373328
Number of successful extensions: 1083
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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