Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00968
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.80 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 4   LNRASR*AHGALTSLEDVANTSPSKSSPTGSETRPTEKIRRETQ 135
           L  AS    G  T    VA ++ + +  TG+ T PT ++R+  Q
Sbjct: 228 LPAASATGTGPATPSAVVATSNATAAMTTGTTTIPTRRLRKRRQ 271


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 722 FWFQ*HSQYCNPIFSKYEYH 781
           F  Q H  Y +P+ SKYE H
Sbjct: 346 FRIQHHFFYPDPLASKYELH 365


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 201 FPSKPSLATKISVSKSTHRHNPLSFSPDLLSGSRFRSGGTALTRTSVS 58
           FPS   +AT    S+ST +      SPD  S   +R    AL ++  S
Sbjct: 392 FPSLYPMATTSPQSQSTIQTLRPQVSPDRTSPMEYRLYNPALIQSQPS 439


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -2

Query: 710 KIDTHYTFDITQGVCFISRETTRSDTIVILLQSRRPSCWDK 588
           +I T++TF    G+     E  +    + +L  +RP   DK
Sbjct: 328 EISTYFTFTRPCGITLTFHEILKRANTLFVLTLQRPQDVDK 368


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 11  ERVGELTGL*PRWRMLLTLVLVRAVPPDR 97
           E V  L+    R +M L LVL    PP++
Sbjct: 71  ESVSALSSFYDRTKMSLQLVLAALYPPNK 99


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 11  ERVGELTGL*PRWRMLLTLVLVRAVPPDR 97
           E V  L+    R +M L LVL    PP++
Sbjct: 86  ESVSALSSFYDRTKMSLQLVLAALYPPNK 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,670
Number of Sequences: 438
Number of extensions: 5537
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)