Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00967
(798 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 169 2e-42
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 169 2e-42
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 169 2e-42
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 169 2e-42
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 168 3e-42
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 168 3e-42
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 162 3e-40
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 106 2e-23
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 104 6e-23
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 103 1e-22
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 103 1e-22
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 101 4e-22
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 101 4e-22
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 101 7e-22
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 101 7e-22
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 98 7e-21
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 66 2e-11
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 66 3e-11
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 30 1.5
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 2.0
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 6.2
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 6.2
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 28 8.3
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 28 8.3
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 81/104 (77%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG--VPALGSL 529
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GG LGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 145 bits (351), Expect = 3e-35
Identities = 64/84 (76%), Positives = 77/84 (91%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++
Sbjct: 145 TGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILL 204
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEAIYDICRR+L+IERPTYTNLN
Sbjct: 205 DNEAIYDICRRSLNIERPTYTNLN 228
Score = 129 bits (312), Expect = 2e-30
Identities = 52/63 (82%), Positives = 58/63 (92%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 169 bits (411), Expect = 2e-42
Identities = 81/104 (77%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG--VPALGSL 529
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GG LGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 145 bits (351), Expect = 3e-35
Identities = 64/84 (76%), Positives = 77/84 (91%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++
Sbjct: 145 TGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILL 204
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEAIYDICRR+L+IERPTYTNLN
Sbjct: 205 DNEAIYDICRRSLNIERPTYTNLN 228
Score = 129 bits (312), Expect = 2e-30
Identities = 52/63 (82%), Positives = 58/63 (92%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 81/104 (77%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG--VPALGSL 529
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GG LGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 144 bits (350), Expect = 5e-35
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++
Sbjct: 145 TGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILL 204
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEAIYDICRR+L IERPTYTNLN
Sbjct: 205 DNEAIYDICRRSLSIERPTYTNLN 228
Score = 130 bits (315), Expect = 8e-31
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 81/104 (77%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG--VPALGSL 529
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GG LGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 144 bits (350), Expect = 5e-35
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++
Sbjct: 145 TGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILL 204
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEAIYDICRR+L IERPTYTNLN
Sbjct: 205 DNEAIYDICRRSLSIERPTYTNLN 228
Score = 130 bits (315), Expect = 8e-31
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 168 bits (409), Expect = 3e-42
Identities = 79/104 (75%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG--VPALGSL 529
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GG LGSL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 149 bits (362), Expect = 2e-36
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++
Sbjct: 145 TGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEAIYDICRR+LDIERPTYTNLN
Sbjct: 205 DNEAIYDICRRSLDIERPTYTNLN 228
Score = 112 bits (269), Expect = 3e-25
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 168 bits (409), Expect = 3e-42
Identities = 79/104 (75%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG--VPALGSL 529
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GG LGSL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 149 bits (362), Expect = 2e-36
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++
Sbjct: 145 TGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEAIYDICRR+LDIERPTYTNLN
Sbjct: 205 DNEAIYDICRRSLDIERPTYTNLN 228
Score = 112 bits (269), Expect = 3e-25
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 162 bits (393), Expect = 3e-40
Identities = 75/104 (72%), Positives = 87/104 (83%), Gaps = 2/104 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S +HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG--VPALGSL 529
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GG LGSL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 144 bits (350), Expect = 5e-35
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++
Sbjct: 145 TGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLL 204
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEAIYDICRR+LDIERPTY+NLN
Sbjct: 205 DNEAIYDICRRSLDIERPTYSNLN 228
Score = 108 bits (260), Expect = 4e-24
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 106 bits (254), Expect = 2e-23
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 421
+ SC ++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 53 EASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 422 VDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
+D VLD +RK A+ C LQGF + HS GG
Sbjct: 113 IDAVLDVVRKEAENCDCLQGFQVCHSLGG 141
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 143 TGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 202
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + P++ +LN
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLN 226
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 251
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 252 AASTYP 269
P
Sbjct: 56 CGRYVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 104 bits (250), Expect = 6e-23
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 421
+ SC ++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 53 EASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 422 VDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
+D VLD +RK A+ C LQGF + HS GG
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGG 141
Score = 86.2 bits (204), Expect = 2e-17
Identities = 35/84 (41%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 143 TGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 202
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + P++ +LN
Sbjct: 203 DNEALYDICFRTLKLSTPSFGDLN 226
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 103 bits (247), Expect = 1e-22
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 421
+ SC + VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 422 VDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
+D VLD +RK A+ C LQGF + HS GG
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGG 141
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 143 TGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 202
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + P++ +LN
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLN 226
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 261 TYP 269
P
Sbjct: 59 FVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 103 bits (247), Expect = 1e-22
Identities = 43/84 (51%), Positives = 60/84 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 437 DRIRKLADQCTGLQGFLIFHSFGG 508
D +RK A+ C LQGF + HS GG
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGG 142
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 144 TGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 203
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + P++ +LN
Sbjct: 204 DNEALYDICFRTLKLSTPSFGDLN 227
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 197
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD 39
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 101 bits (243), Expect = 4e-22
Identities = 43/84 (51%), Positives = 60/84 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 437 DRIRKLADQCTGLQGFLIFHSFGG 508
D +RK A+ C LQGF + HS GG
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGG 141
Score = 87.8 bits (208), Expect = 7e-18
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 143 TGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 202
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + PT+ +LN
Sbjct: 203 DNEALYDICFRTLKLANPTFGDLN 226
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 101 bits (243), Expect = 4e-22
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 437 DRIRKLADQCTGLQGFLIFHSFGG 508
D +RK A+ C LQGF + HS GG
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGG 142
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 144 TGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 203
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + P++ +LN
Sbjct: 204 DNEALYDICFRTLKLSTPSFGDLN 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 261 TYP 269
P
Sbjct: 60 YVP 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 101 bits (241), Expect = 7e-22
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 421
+ SC + VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E+
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 422 VDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
+D VLD +RK A+ C LQGF + HS GG
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGG 141
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 143 TGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 202
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + P++ +LN
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLN 226
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 261 TYP 269
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 101 bits (241), Expect = 7e-22
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 421
+ SC + VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E+
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 422 VDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
+D VLD +RK A+ C LQGF + HS GG
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGG 141
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 143 TGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 202
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + P++ +LN
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLN 226
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 261 TYP 269
P
Sbjct: 59 FVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 97.9 bits (233), Expect = 7e-21
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 437 DRIRKLADQCTGLQGFLIFHSFGG 508
D +RK A+ LQGF + HS GG
Sbjct: 118 DVVRKEAENSDCLQGFQVCHSLGG 141
Score = 87.8 bits (208), Expect = 7e-18
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
TGSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++
Sbjct: 143 TGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVL 202
Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
DNEA+YDIC R L + PT+ +LN
Sbjct: 203 DNEALYDICFRTLKLANPTFGDLN 226
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 406
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 407 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY 535
GK + + ++D I + AD L+GF++ HS G G Y
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFM 687
TGSG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC +
Sbjct: 145 TGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVV 204
Query: 688 VDNEAIYDICRRNLDIERPTYTNLN 762
+DN A+ I L + PT+ N
Sbjct: 205 LDNTALGRIAVERLHLTNPTFAQTN 229
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 239
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 406
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 407 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGVPALGSLPY 535
GK + + ++D I + AD L+GF++ HS G G Y
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFM 687
TGSG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC +
Sbjct: 145 TGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVV 204
Query: 688 VDNEAIYDICRRNLDIERPTYTNLN 762
+DN A+ I L + PT+ N
Sbjct: 205 LDNTALNRIAVERLHLTNPTFAQTN 229
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 239
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -3
Query: 256 AAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 125
A PVS L +SPP +W SGW P +PI
Sbjct: 99 APPVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 735 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 601
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 304 NNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPPM 203
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 553 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 714
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 715 CRRNLDIERPTYTNL 759
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -3
Query: 343 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 191
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 190 GIWPSGWMPCSR 155
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -3
Query: 343 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 191
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 190 GIWPSGWMPCSR 155
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,220,789
Number of Sequences: 28952
Number of extensions: 409494
Number of successful extensions: 1349
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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