Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00966
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 37 0.017
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 36 0.039
08_02_0721 + 20401217-20401360,20401689-20401809,20401969-204020... 33 0.21
03_02_0415 - 8263459-8263611,8263788-8263919,8264841-8264936,826... 30 1.5
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 30 2.0
07_03_1063 + 23693549-23694833,23695102-23695146,23695495-23695550 29 2.6
05_05_0038 - 21769936-21770199,21770785-21771198,21771274-217714... 29 2.6
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 29 2.6
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 29 2.6
12_01_0825 - 7611594-7611728,7612061-7612276,7612505-7612589,761... 29 3.4
05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594 29 3.4
04_04_1074 + 30628192-30628456,30628924-30629144 29 3.4
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 29 3.4
01_06_0584 - 30407012-30408531,30408625-30408955 29 3.4
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 29 4.5
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 29 4.5
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 29 4.5
02_05_0936 - 32875479-32875573,32875794-32876028,32877752-328778... 29 4.5
02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227 29 4.5
11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 28 6.0
07_03_1554 + 27659995-27660093,27661084-27661120,27661204-276612... 28 6.0
02_05_0863 + 32313890-32314132,32314227-32314517,32315157-323154... 28 6.0
02_05_0779 + 31702039-31702977 28 6.0
05_03_0459 - 14284513-14286336 28 7.9
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 375 GYLHKLGAKFHTWSKRWFVFDRETKTFVYYWDKSEKKPRG 494
GYL K AK + WSKRWFV + ++ Y + E+ RG
Sbjct: 597 GYLLKKSAKNNEWSKRWFVLNEKSGKLGYTKKQEERHFRG 636
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 375 GYLHKLGAKFHTWSKRWFVFDRETKTFVYYWDKSEKKPRG 494
GYL K AK + WS+RWFV + ++ Y + E+ RG
Sbjct: 584 GYLLKKSAKTNGWSRRWFVLNEKSGKLGYTKKQEERHFRG 623
>08_02_0721 +
20401217-20401360,20401689-20401809,20401969-20402067,
20402790-20402851,20403680-20403797,20404004-20404343,
20404435-20404582,20405043-20405144,20405240-20405359,
20405812-20405895,20405974-20406101,20408314-20408389,
20408556-20408631,20408800-20408876,20408975-20409031,
20409411-20409555,20409634-20409806,20409928-20410054,
20410090-20410192,20410492-20410688,20410946-20411097
Length = 882
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 375 GYLHKLGAKFHTWSKRWFVFDRETKTFVYYWDKSEKKPRG 494
G+L K AK + WS RWFV + + Y + E+ RG
Sbjct: 540 GFLFKKRAKANDWSNRWFVLNERSGKLGYTKKQEERHFRG 579
>03_02_0415 -
8263459-8263611,8263788-8263919,8264841-8264936,
8265021-8265137,8265352-8265435,8265517-8265577,
8266217-8266266,8266544-8266633,8267539-8267757,
8269207-8269262,8269469-8269546,8269707-8269811,
8269925-8270069,8270310-8270388,8270470-8270537,
8271550-8271626,8272676-8272712,8273107-8273232,
8273770-8273805
Length = 602
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 339 CPYVSVTSSSCRGYLHKLGAKFHTWSKRWFVFDRETKTFVYYWDKSEKKPRG 494
CP V S L G + TW KRWF+ R + V++ PRG
Sbjct: 50 CPNCQVLKSG-HLLLSSKGIGWTTWKKRWFILTR--ASLVFFRSDPNAPPRG 98
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 7 SVMDDSFIGNCSVXDESSGLFSSSIEELQ--VRNSRTESTEEDKRSDDSRPLSHASDFSR 180
S++ F G V GL +EEL+ +RN + E + D+RPLS + D +
Sbjct: 221 SILGSFFTGQMQVWTREVGL-DKQVEELETEMRNMQMVLAEAEGTKIDNRPLSESLDEIK 279
Query: 181 DNILSLSNAP 210
+ I + P
Sbjct: 280 ELIYDAEDFP 289
>07_03_1063 + 23693549-23694833,23695102-23695146,23695495-23695550
Length = 461
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 34 NCSVXDESSGLFSSSIEELQVRNSRTESTEEDKRSDDSRP--LSHASDFSRDNILSLSNA 207
N + E GL S++E + T + D + ++ + FS DN + S
Sbjct: 206 NQIMLSEYIGLPCSAVEPQSSESLLTSEEDGDGATAETHVAGVRVVQSFSTDNSTADSAG 265
Query: 208 PRRSRRGIAPYSESQSPSRGTCPSTGKTSICGDTSSLLATKSNSA 342
RS ++ S ++SP+ P+T +++ G+ S K +A
Sbjct: 266 TFRSDTPVSSVSTTESPAAAAVPATPQSNSSGNAVSSAEQKEKAA 310
>05_05_0038 -
21769936-21770199,21770785-21771198,21771274-21771434,
21771544-21771607,21771682-21771864,21772355-21772520,
21773397-21773528,21775085-21775599
Length = 632
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 375 GYLHKLGAKFHTWSKRWFVFDRETKTFVYYWDKSEKKPRG 494
G+L+K G TW +RWFV K +W K RG
Sbjct: 42 GWLNKQGEYIKTWRRRWFVL----KQGRLFWFKDAAVTRG 77
>04_04_0200 -
23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 175 SRDNILSLSNAPRRSRRGIAPYSESQSPSRGTCPSTGKTSI 297
+RD+ S+ NA + + P +ES PS+ T P GK+++
Sbjct: 151 TRDDGSSIVNASNINFQSCQPVAESLGPSQYTSPEDGKSAV 191
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 205 APRRSRRGIAPYSESQSPSRGT 270
APRR RR +AP + S SPS T
Sbjct: 23 APRRHRRALAPRAASSSPSPST 44
>12_01_0825 -
7611594-7611728,7612061-7612276,7612505-7612589,
7613170-7613372,7613935-7615723,7616322-7616450,
7616825-7616928,7618725-7618779,7618860-7618975
Length = 943
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 34 NCSVXDESS-GLFSSSIEELQVRNSRTESTEEDKRSDDSRPLSHASDFSRDNILSLSNAP 210
+C V D SS G+ + I + T+S +RS S+PL +FS +N +L N
Sbjct: 632 DCGVSDTSSIGIQTCFINATKDDAVITKSVLRIERSASSKPLEKKLEFSDENKENLDNTI 691
Query: 211 RRSRRG 228
+++ G
Sbjct: 692 EQAKDG 697
>05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594
Length = 622
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 61 GLFSSSIEELQVRNSRT-ESTEEDKRSDDS-RPLSHASDFSRDNILSLSNAPRRSRRGIA 234
G S + +++V N + + T RS S RPL H + +R SL PRR +
Sbjct: 11 GEVPSLLPDVEVTNVASFDVTAPSPRSQPSPRPLPHPNTPTRPRAPSLVRVPRRGGEAVV 70
Query: 235 PYSES 249
P ES
Sbjct: 71 PPLES 75
>04_04_1074 + 30628192-30628456,30628924-30629144
Length = 161
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 394 PSLCKYPRHELEVTLT*GQSSTWWPADS 311
PS C Y R L V+ GQS++ WP S
Sbjct: 68 PSRCDYRRKNLVVSFGAGQSTSRWPVPS 95
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 372 RGYLHKLGAKFHTWSKRWFVFDRETKTFVYYWDKSEKK 485
+GYL K W +R+FV D T YY +K + +
Sbjct: 186 QGYLFKRSENSREWKRRFFVLDSH-GTLFYYGNKGQSQ 222
>01_06_0584 - 30407012-30408531,30408625-30408955
Length = 616
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 407 HVVQKMVRFRQRNENLRILLGQE*EETQGRCIFPVIE-EVYLDHGNTSKSPNPQ--TTFI 577
H++ +R Q + NLR+LLG + + GRC+ PV+ VY + + PQ F+
Sbjct: 390 HMLALALRRMQASPNLRLLLGGD-RPSGGRCL-PVLSFVVYSPRDGSEQDERPQLHCRFV 447
Query: 578 VKTRQRRYYLMAPSG 622
K + + A G
Sbjct: 448 TKLLNDLFGVQARGG 462
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 190 LSLSNAPRRSRRGIAPYSESQSPSRGTCPSTGKTSICGDTSSLLATKSNSA 342
+S+ R RR + + S + S +CP +S G TSS + + N++
Sbjct: 435 VSMGRPSRPPRRALNRINSSSTYSSSSCPPEPTSSTSGSTSSWVPPRDNAS 485
>03_04_0157 +
17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 241 SESQSPSRGTCPSTGKTSICGDTSSLLATKSN 336
S + R CPSTGK CGD + ++S+
Sbjct: 205 SLKNADGRPICPSTGKPCSCGDQKDINGSESS 236
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 339 CPYVSVTSSSCRGYLHKLGAKFHTWSKRWFVFDRETKTF 455
CP V S L G + TW KRWF+ R + F
Sbjct: 48 CPNCQVLKSG-HLLLSSKGIGWTTWKKRWFILTRASLVF 85
>02_05_0936 -
32875479-32875573,32875794-32876028,32877752-32877848,
32878863-32878927,32879506-32879571,32879735-32879842,
32880169-32880303,32880582-32880647,32881172-32881222,
32881312-32881386,32881834-32881896,32882694-32882783,
32882903-32883100,32883189-32883315,32883482-32884100,
32884228-32884265,32884651-32884718,32885056-32885100,
32885243-32885302,32885510-32885593,32885677-32885868,
32887361-32887663
Length = 959
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 320 WPPSRTLPLRERDFEFVPRVFT*TGRQVSHVVQKMVRFRQRNENLRILLGQE 475
+PP R LPL+ +D F G H V++ F + NE ILLGQE
Sbjct: 170 YPPERPLPLKYKDI----LSFCLPGGVQVHAVERTPSFSELNE---ILLGQE 214
>02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227
Length = 1000
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 234 TLQRVTEPLTRYLPVDREDFDLRRHVESAGHQV 332
TLQR+T T+ LP+ FD ++ AG+Q+
Sbjct: 713 TLQRLTYTKTKVLPLPIGKFDCLEELDVAGYQI 745
>11_01_0656 -
5301048-5301441,5301779-5301976,5302056-5302228,
5302691-5302935,5303014-5303191,5303578-5303760,
5303858-5303962,5304621-5304758,5304846-5305802
Length = 856
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 100 NSRTESTEEDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRG 228
NS ++ E D DDSR LSH S S S + RRG
Sbjct: 107 NSVLQNEEFDDDDDDSRSLSHDSAQSSPGPQDRSRRTQEGRRG 149
>07_03_1554 +
27659995-27660093,27661084-27661120,27661204-27661280,
27662272-27662342,27662512-27662590,27662726-27662828,
27662963-27663082,27663180-27663257,27663416-27663471,
27663588-27663657,27664179-27664266,27664503-27664800,
27664943-27665158,27665521-27665841,27666054-27666103,
27666493-27666553,27666633-27666716,27666926-27667039,
27667134-27667300,27667559-27667628,27668328-27668507,
27668619-27668807
Length = 875
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 378 YLHKLGAKFHTWSKRWFVFDRETKTFVYYWDKSEKKPRGG 497
++ G + +W KRWF+ R + F + D + RGG
Sbjct: 41 FISSKGIGWKSWKKRWFILTRTSLVF-FKSDPNTLPQRGG 79
>02_05_0863 +
32313890-32314132,32314227-32314517,32315157-32315493,
32315944-32316278,32316763-32317010,32317296-32317881,
32317970-32318083,32318165-32318287,32318325-32318531
Length = 827
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 55 SSGLFSSSIEELQVRN-SRTESTEEDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRGI 231
++G S +E V + TEST ED P + S+ + +S R RG+
Sbjct: 538 AAGSVDSDMERRSVTHWEETESTREDGELLAVVPAENTPSVSKISHSEVSPEVRNHSRGL 597
Query: 232 APYSESQSPSR 264
+ S+S +PS+
Sbjct: 598 SLISKSATPSK 608
>02_05_0779 + 31702039-31702977
Length = 312
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 82 EELQVRNSRTESTEEDKRSDDSRPLSHASDFSRDNI 189
EE ++NS+ E EED++ + +S+A DF + ++
Sbjct: 254 EEEVIKNSKKEEEEEDEKEERLVLMSYAPDFFKVSV 289
>05_03_0459 - 14284513-14286336
Length = 607
Score = 27.9 bits (59), Expect = 7.9
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 DSSVMDDSFIGNCSVXDESSGLFSSSIEELQVRNSRTES-TEEDKRSDDSRPLSHASDFS 177
DSS S G+ S SSG S S +S + S T+ D S +RP + +
Sbjct: 274 DSSSSSSSSNGSGSSSSSSSGASSGSSSCAGSSSSSSGSDTDADADSASNRPDTTTDHPT 333
Query: 178 RDNILSL-SNAPRRSRRGIAPYSESQSPSRGTCPSTGKTSICGDTSSLLATKSNSAP 345
+ + + + + + SP+ C + ICG S L+ K+ +P
Sbjct: 334 EAEVKPMVEHEVMEQDKKLTTERAAASPASQLCITDMGIDICGGVSPLVVDKAQFSP 390
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,377,065
Number of Sequences: 37544
Number of extensions: 381374
Number of successful extensions: 1289
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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