Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00966
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           28   0.31 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.55 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.55 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.55 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.55 
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    26   0.96 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    24   5.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
 Frame = +1

Query: 106  RTESTEEDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRGIA----PYSESQSPSRGTC 273
            R+  T       DS+P S  S   + N+  +  A   S   +A    P     SPS  T 
Sbjct: 891  RSLCTNGSSSGRDSQPSSARSTPKKQNLKFIDEASTPSTSAMAATIVPNPVQASPSPATA 950

Query: 274  PSTGKTSICGDTSSL 318
            P+  KT+    T+ L
Sbjct: 951  PAPAKTTSTDSTNGL 965


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 7   SVMDDSFIGNCSVXDESSGLFSSSIEELQVRNSRTESTEEDKRSDDSRPLSHASDFSRDN 186
           +++D  + G  +V   +   F  + E L+VR     S +      DS+  S     SRD 
Sbjct: 129 ALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDE 188

Query: 187 ILSLSNA 207
             SL NA
Sbjct: 189 RDSLPNA 195


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 7   SVMDDSFIGNCSVXDESSGLFSSSIEELQVRNSRTESTEEDKRSDDSRPLSHASDFSRDN 186
           +++D  + G  +V   +   F  + E L+VR     S +      DS+  S     SRD 
Sbjct: 129 ALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDE 188

Query: 187 ILSLSNA 207
             SL NA
Sbjct: 189 RDSLPNA 195


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 7   SVMDDSFIGNCSVXDESSGLFSSSIEELQVRNSRTESTEEDKRSDDSRPLSHASDFSRDN 186
           +++D  + G  +V   +   F  + E L+VR     S +      DS+  S     SRD 
Sbjct: 81  ALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDE 140

Query: 187 ILSLSNA 207
             SL NA
Sbjct: 141 RDSLPNA 147


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 7   SVMDDSFIGNCSVXDESSGLFSSSIEELQVRNSRTESTEEDKRSDDSRPLSHASDFSRDN 186
           +++D  + G  +V   +   F  + E L+VR     S +      DS+  S     SRD 
Sbjct: 129 ALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDE 188

Query: 187 ILSLSNA 207
             SL NA
Sbjct: 189 RDSLPNA 195


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 287 RLRSAETRRVCWPPSRTLP 343
           R RS ETRR+  PP R+ P
Sbjct: 84  RNRSKETRRIRTPPQRSFP 102


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +1

Query: 397 PSFTRGPK--DGSFSTEKRKPSYTTGTRVRRNPGAVHIS 507
           PS   GP   +GS +  K+K S     + R+ P A+ IS
Sbjct: 85  PSPRNGPNINEGSINKRKKKKSKKKQNKPRKRPEALLIS 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,356
Number of Sequences: 2352
Number of extensions: 13132
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)