Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00966
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 37 0.012
Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical pr... 35 0.062
AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein. 35 0.062
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 31 0.76
Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical pr... 30 1.3
AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box transcr... 30 1.3
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 30 1.8
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 30 1.8
L15314-3|AAF99986.2| 393|Caenorhabditis elegans Gtp exchange fa... 30 1.8
AJ236896-1|CAB38534.1| 377|Caenorhabditis elegans GRP1 protein ... 30 1.8
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 29 2.3
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 29 2.3
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 29 2.3
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 29 2.3
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF040642-3|AAN73872.2| 502|Caenorhabditis elegans Hypothetical ... 29 3.1
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 29 4.1
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 28 5.4
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 5.4
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 5.4
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 7.1
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 27 9.4
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 27 9.4
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 27 9.4
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 27 9.4
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 342 PYVSVTSSSCRGYLHKLGAKFHTWSKRWFVFDRETKTFVYYWD----KSEKKPRG 494
P + C GYL K GAK W R+FV ++ YY D K+ +KP G
Sbjct: 1637 PTANTIPPLCTGYLSKRGAKLKLWVPRFFVLYPDSPKVYYYEDFENWKTAEKPSG 1691
>Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical
protein F43G9.11 protein.
Length = 270
Score = 34.7 bits (76), Expect = 0.062
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +1
Query: 13 MDDSFIGNCSVXDESSGLFS-------SSIEELQVRNSRTESTEEDKRSDDSRPLSHASD 171
+D IGNC + L S SS +S + S+E K+S S + + S
Sbjct: 17 VDFPIIGNCDFQAQLWHLMSLHLQMQKSSAASTSSSSSSSTSSENLKKSPSS--VQNTSV 74
Query: 172 FSRDNILSLSNAPRRSRRGIAPYSESQSPSRGTCPSTGKT 291
FS DNIL+ P+ S S SP TC +TG T
Sbjct: 75 FSIDNILNSQKVPKLELENDEDVSSSPSP---TCSTTGYT 111
>AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein.
Length = 270
Score = 34.7 bits (76), Expect = 0.062
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +1
Query: 13 MDDSFIGNCSVXDESSGLFS-------SSIEELQVRNSRTESTEEDKRSDDSRPLSHASD 171
+D IGNC + L S SS +S + S+E K+S S + + S
Sbjct: 17 VDFPIIGNCDFQAQLWHLMSLHLQMQKSSAASTSSSSSSSTSSENLKKSPSS--VQNTSV 74
Query: 172 FSRDNILSLSNAPRRSRRGIAPYSESQSPSRGTCPSTGKT 291
FS DNIL+ P+ S S SP TC +TG T
Sbjct: 75 FSIDNILNSQKVPKLELENDEDVSSSPSP---TCSTTGYT 111
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 31.1 bits (67), Expect = 0.76
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +1
Query: 37 CSVXDESSGLFSSSIEELQVRNSRTEST-EEDKRSDDSRPLSHASDFSRDNILSLSNAPR 213
CS+ +SS SSS +S T +T +D S S S AS S + + ++
Sbjct: 36 CSLCSDSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSST 95
Query: 214 RSRRGIAPYSESQSPSRGTCPSTGKTSICGDTSSLLAT 327
S + S + S S + S+ TS+ TSS T
Sbjct: 96 TS----SDSSTTSSNSSSSTSSSDSTSVVSSTSSSTTT 129
>Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical
protein T07C4.6 protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 400 SFTRGPKDGSFSTEKRKPSYTTGT 471
SF +G +DG+ S ++R PSY+ G+
Sbjct: 187 SFAKGFRDGNLSRKRRSPSYSDGS 210
>AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box
transcription factor TBX-9 protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 400 SFTRGPKDGSFSTEKRKPSYTTGT 471
SF +G +DG+ S ++R PSY+ G+
Sbjct: 187 SFAKGFRDGNLSRKRRSPSYSDGS 210
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 288 DFDLRRHVESAGHQVELCPYVSVTSSSCRGYLHKLGAKFHTWSKRWFVFDRETKTFVYYW 467
D+DL E G+ E+ P + V + +K + W+KR+FV + F+ Y+
Sbjct: 62 DYDLTPEEEGDGYGDEMGPVLGVQNYGILMKKYKRKNRSARWAKRFFVL---KECFLIYY 118
Query: 468 DKSEKK 485
S KK
Sbjct: 119 STSYKK 124
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Frame = -2
Query: 477 HSCPSSIRRFSFLCRKRTIF---WT--TCETWRP 391
H CP S +FS LCR R + WT TC++ P
Sbjct: 190 HLCPKSYTQFSNLCRHRRVHSDGWTCPTCQSQMP 223
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Frame = -2
Query: 477 HSCPSSIRRFSFLCRKRTIF---WT--TCETWRP 391
H CP S +FS LCR R + WT TC++ P
Sbjct: 190 HLCPKSYTQFSNLCRHRRVHSDGWTCPTCQSQMP 223
>L15314-3|AAF99986.2| 393|Caenorhabditis elegans Gtp exchange
factor for arfs protein1 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 408 TWSKRWFVFDRETKTFVYYWDK-SEKKPRG 494
+W KRWFV ++ +YY+D+ ++K+P+G
Sbjct: 282 SWKKRWFVL---SENCLYYFDQMTDKEPKG 308
>AJ236896-1|CAB38534.1| 377|Caenorhabditis elegans GRP1 protein
protein.
Length = 377
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 408 TWSKRWFVFDRETKTFVYYWDK-SEKKPRG 494
+W KRWFV ++ +YY+D+ ++K+P+G
Sbjct: 266 SWKKRWFVL---SENCLYYFDQMTDKEPKG 292
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 136 SDDSRPLSHASDFSRD-NILSLSNAP---RRSRRGIAPYSESQSPSRGTCPSTGKTSI 297
+DD R S+ S D N S S +P + S+R PYS + RG+ PS G I
Sbjct: 52 ADDRRLFSYVSSMRSDSNSSSKSPSPPSAKMSKRPNGPYSVRKYQPRGSPPSDGSDKI 109
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 136 SDDSRPLSHASDFSRD-NILSLSNAP---RRSRRGIAPYSESQSPSRGTCPSTGKTSI 297
+DD R S+ S D N S S +P + S+R PYS + RG+ PS G I
Sbjct: 52 ADDRRLFSYVSSMRSDSNSSSKSPSPPSAKMSKRPNGPYSVRKYQPRGSPPSDGSDKI 109
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 136 SDDSRPLSHASDFSRD-NILSLSNAP---RRSRRGIAPYSESQSPSRGTCPSTGKTSI 297
+DD R S+ S D N S S +P + S+R PYS + RG+ PS G I
Sbjct: 52 ADDRRLFSYVSSMRSDSNSSSKSPSPPSAKMSKRPNGPYSVRKYQPRGSPPSDGSDKI 109
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +1
Query: 76 SIEELQVRNSRTESTEED-KRSDDSRPL---SHASD--FSRDNILSLSNAPRRSRRGIAP 237
S E+++ R S E +E+D KRS D R +H D +R S S +P+RSRR
Sbjct: 8 SPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRNRSRSRSRSRSPKRSRRDKKE 67
Query: 238 YSESQSPSRGTCPST 282
+ Q G T
Sbjct: 68 EKQEQEEEDGEIRDT 82
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 124 EDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRGIAPYSESQSPSRGTCPS 279
E S D RP+S ASD S + L+ ++ +A + SPS G+ PS
Sbjct: 538 EVSESIDIRPVSRASDSSSVHSQHLTVPTNKAVTSVAHGTPKPSPSAGSTPS 589
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Frame = +1
Query: 382 YINWAPSFTRGPKDGSFSTEKRKPSYTTGTRVRRNPGAVHISSDRRSVFRSRQHVEIAEP 561
Y N AP + PK S R + + + PG H+SS +R + + E A
Sbjct: 11 YGNRAPQKKKKPKKPSAELPSRHSTRSDENSGKIEPGTEHMSSGQRKNLKLLKSDERARV 70
Query: 562 TDD----VHCQN*TKTLLFNGSVRGSGPDMDRCAIHRRPGI 672
D Q TLL NG +G D+D +R I
Sbjct: 71 IDARAVLDSAQKHLATLLKNGG-KGGDEDIDELIFNREAEI 110
>AF040642-3|AAN73872.2| 502|Caenorhabditis elegans Hypothetical
protein C50D2.7 protein.
Length = 502
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 371 ARTRSHAHVGAEFDLVASRLDVS-PQIEVFPVDGQVPR 261
A TRSH H+G L+A R+ + P EV+ V PR
Sbjct: 140 ASTRSHHHIGGNAALMADRIAANFPSTEVYLVGPIGPR 177
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +1
Query: 70 SSSIEELQVRNSRTESTEEDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRGIAPYSES 249
SSS + R R+ S++ + SR S + +SR S ++ RRSRR S
Sbjct: 107 SSSRGSVYGRTGRSRSSKRSRSRSRSRSRSRSRSYSRSRSGSRRSSRRRSRR------RS 160
Query: 250 QSPSRGTCPSTGK 288
+RG ST K
Sbjct: 161 SLKARGRRASTAK 173
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 124 EDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRGIAPYSESQSPSR-GTCPSTGKTSIC 300
ED+ DS P + R LSN RR R + S SP R S+ +TS
Sbjct: 143 EDESDSDSTP----GEVQRRKTSVLSNDKRRRRASFSSTSIQSSPERQRDVSSSSRTSSS 198
Query: 301 GDTSSL 318
TSS+
Sbjct: 199 SSTSSM 204
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 124 EDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRGIAPYSESQSPSR-GTCPSTGKTSIC 300
ED+ DS P + R LSN RR R + S SP R S+ +TS
Sbjct: 914 EDESDSDSTP----GEVQRRKTSVLSNDKRRRRASFSSTSIQSSPERQRDVSSSSRTSSS 969
Query: 301 GDTSSL 318
TSS+
Sbjct: 970 SSTSSM 975
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 124 EDKRSDDSRPLSHASDFSRDNILSLSNAPRRSRRGIAPYSESQSPSR-GTCPSTGKTSIC 300
ED+ DS P + R LSN RR R + S SP R S+ +TS
Sbjct: 911 EDESDSDSTP----GEVQRRKTSVLSNDKRRRRASFSSTSIQSSPERQRDVSSSSRTSSS 966
Query: 301 GDTSSL 318
TSS+
Sbjct: 967 SSTSSM 972
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily assigned
gene nameprotein 59 protein.
Length = 1592
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 460 TTGTRVRRNPGAVH-ISSDRRSVFRSRQHVEIAEPTDDVH 576
T G +V R I D RS R H++I+ P+D +H
Sbjct: 1513 TDGRKVTRRKFTFRTIGKDDRSASERRSHIQISTPSDFMH 1552
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 375 GYLHKLGAK-FHTWSKRWF 428
GYL+K + F TW++RWF
Sbjct: 196 GYLYKRSSNAFKTWNRRWF 214
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 375 GYLHKLGAK-FHTWSKRWF 428
GYL+K + F TW++RWF
Sbjct: 280 GYLYKRSSNAFKTWNRRWF 298
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 375 GYLHKLGAK-FHTWSKRWF 428
GYL+K + F TW++RWF
Sbjct: 196 GYLYKRSSNAFKTWNRRWF 214
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 375 GYLHKLGAK-FHTWSKRWF 428
GYL+K + F TW++RWF
Sbjct: 280 GYLYKRSSNAFKTWNRRWF 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,224,987
Number of Sequences: 27780
Number of extensions: 313261
Number of successful extensions: 1183
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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