Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00965
(802 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0C5J6 Cluster: Chromosome undetermined scaffold_15, wh... 37 0.51
UniRef50_Q6EB80 Cluster: Tgh049; n=4; Campylobacter jejuni|Rep: ... 36 1.6
UniRef50_Q8IBL0 Cluster: Putative uncharacterized protein PF07_0... 34 3.6
UniRef50_UPI00006CC8C8 Cluster: conserved hypothetical protein; ... 34 4.8
UniRef50_Q23RM9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A7RI99 Cluster: Predicted protein; n=2; Nematostella ve... 34 4.8
UniRef50_A0CGU4 Cluster: Chromosome undetermined scaffold_18, wh... 34 4.8
UniRef50_A5TSB8 Cluster: Putative uncharacterized protein; n=2; ... 33 6.3
UniRef50_Q8IDT3 Cluster: Putative uncharacterized protein PF13_0... 33 6.3
UniRef50_Q4L9Y5 Cluster: Similar to unknown protein; n=1; Staphy... 33 8.4
>UniRef50_A0C5J6 Cluster: Chromosome undetermined scaffold_15, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_15, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2975
Score = 37.1 bits (82), Expect = 0.51
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +1
Query: 508 LIYDTKSIADIVKSNNENVEFVSGSLVNVGLF-------LVPKDSNRSNFDSFSLILNSS 666
LIY K + I+ SN +N F G L+N L L + +++NFDS S++ +
Sbjct: 2874 LIYQEKQLIAILDSNTQNRTFQIGDLINEYLTQRTGKKQLQISEISKNNFDSQSILDDVL 2933
Query: 667 EWAKARIQKSINEFANMVPHFEHSIALKLSCVVVIKSMKLNSN 795
E + + I +F + F + I + +C +IK + + SN
Sbjct: 2934 EKSSLKTLNGIQKFFEALAIF-YQIGTEHNCKDLIKRLIVESN 2975
>UniRef50_Q6EB80 Cluster: Tgh049; n=4; Campylobacter jejuni|Rep:
Tgh049 - Campylobacter jejuni
Length = 680
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 317 VEEMQKKFYDVIDELEK-KYIFKTVLAYVTEAFLFHSVEEVVFLNYLKKVQPDIPY 481
+E ++ F IDEL K K+ + +L Y+ A LFH + +L++LK P IP+
Sbjct: 501 IENFKESFRTFIDELYKEKFSPEDILGYI-YAVLFHKIYREKYLDFLKIDFPKIPF 555
>UniRef50_Q8IBL0 Cluster: Putative uncharacterized protein
PF07_0102; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0102 - Plasmodium
falciparum (isolate 3D7)
Length = 427
Score = 34.3 bits (75), Expect = 3.6
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +2
Query: 284 DVEFKVISIRNVEEMQKKFYDVIDELEKKYIFKTVLAYVTEAFLFHSVEEVVFLN--YLK 457
D K++S + V + + ++IDEL Y FKT+ +Y+ ++ LF EE+ +N Y+K
Sbjct: 48 DANIKIVSNKKVIKNKD---EIIDEL--LYAFKTMGSYINKSDLFSKNEEIEDINTKYIK 102
Query: 458 KVQPDIPYALGGCIVE 505
+ IP+ LG E
Sbjct: 103 LLL--IPFILGNLCYE 116
>UniRef50_UPI00006CC8C8 Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 784
Score = 33.9 bits (74), Expect = 4.8
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 502 RRLIYDTKSIADIVKSNNENVEFVSGSLVNVGLFLVPKDSNRSNFDSFSLILNSSEWAKA 681
+ L+ TK + N +E + + + + + S + FSL L+S +
Sbjct: 293 QNLVLQTKDLIPTSNQNEMEIEEENNANLMINEEIEKYKSKTKFYKQFSLELSSINLSVF 352
Query: 682 RIQKSINEFANMVPHFEHSIALKLS 756
K+I F NM+ H + S+ +KL+
Sbjct: 353 AEDKTIKLFCNMINHLKQSLKIKLA 377
>UniRef50_Q23RM9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 666
Score = 33.9 bits (74), Expect = 4.8
Identities = 28/137 (20%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Frame = -1
Query: 643 MNQNYFCSNLWEQGIIQHLLSFHLQIQH-SHYYSSQCQLCFLYHILIFDNTTTKCIRDIR 467
+++++ NL+ Q I L + ++ YY +L +++ + FD T T+ +
Sbjct: 77 LSEDFEKYNLFYQEITNQCLRSDMILKMIDQYYLDTDRLFYVFEMECFDFTLTQFKNRFQ 136
Query: 466 LYFFQIIQEDNFFHRMEQESLSDVSQNSFKYVXXXXXXXXXXXFLLHFFHISDTN-DFKF 290
L + NF + Q+++ Q +FK + L+ F++ D N DF+
Sbjct: 137 LEHQMTQKIQNFVQKFYQQNVEIFYQKNFKDLQEYFVQINSNNQLIVKFNLIDPNWDFES 196
Query: 289 NIWHHRYIKTTKNGFGR 239
H+ + +T F +
Sbjct: 197 YFQKHQIVGSTNINFSK 213
>UniRef50_A7RI99 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 266
Score = 33.9 bits (74), Expect = 4.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 58 QFHHIHAAHHALMNTLWWMYCK 123
Q +H HHA M LWWM CK
Sbjct: 142 QISFLHVYHHASMCLLWWMVCK 163
>UniRef50_A0CGU4 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 629
Score = 33.9 bits (74), Expect = 4.8
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 484 TWWLYCRRLIYDTKSIADIVKSNNENVEFVSGSLVNVGLFLVPKDSNRSNFDSFSLILNS 663
T+ Y R LI + DIV N + + F ++ ++P NF SF LN
Sbjct: 453 TFQKYPRSLIQNNM-YEDIVSWNEDGLSFTVKNISQFSSIVLPIHFKHQNFSSFIRQLNM 511
Query: 664 SEWAKARIQKSINEFAN 714
++ K R S+NEF N
Sbjct: 512 YDFHKTR-GGSVNEFKN 527
>UniRef50_A5TSB8 Cluster: Putative uncharacterized protein; n=2;
Fusobacterium nucleatum|Rep: Putative uncharacterized
protein - Fusobacterium nucleatum subsp. polymorphum
ATCC 10953
Length = 125
Score = 33.5 bits (73), Expect = 6.3
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 266 YIPMMPDVEFKVISIRNVEEMQKKFYDVIDELEKKYIFKTVLAYVTEAFLFHSV--EEVV 439
++P+MP V F ++++ E KK++D+I L KY K + Y L SV + V+
Sbjct: 25 FLPVMPTVPFLLVALFCFERSSKKYHDMI--LNNKYFGKVLRDYYEGRGLTTSVKIKAVL 82
Query: 440 FLN 448
FL+
Sbjct: 83 FLS 85
>UniRef50_Q8IDT3 Cluster: Putative uncharacterized protein
PF13_0219; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0219 - Plasmodium
falciparum (isolate 3D7)
Length = 955
Score = 33.5 bits (73), Expect = 6.3
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = -1
Query: 646 KMNQNYFCSNLWEQGIIQHLLSFHLQIQHSHYYSSQCQLCFLYHILIFDNTTTKCIRDIR 467
++ QN+F S + G+ + + LQI H ++ C L L+ L D T R I+
Sbjct: 509 RIYQNFFQSYILHYGLYYNDI---LQINHRNF-KENC-LLELFTYLSHDVAYTIVFRYIQ 563
Query: 466 LYFFQIIQEDNFFHRMEQESLSDVSQNSFKYVXXXXXXXXXXXFLLHF--FHI 314
+ +I +E+N R+E+ D +N+ K +LH FHI
Sbjct: 564 IIIQKIREENNKTFRLEKNKKKDTDENNKKEKKYFNHENNKNKGILHLKNFHI 616
>UniRef50_Q4L9Y5 Cluster: Similar to unknown protein; n=1;
Staphylococcus haemolyticus JCSC1435|Rep: Similar to
unknown protein - Staphylococcus haemolyticus (strain
JCSC1435)
Length = 622
Score = 33.1 bits (72), Expect = 8.4
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 176 LIHVTSVIPNL*V*DYTENVLASKSILSCLYIPMMPDVEFKVISIRNVEEMQKKFYDVID 355
L +++ + L V DYT + +++ LY +VI I + M FY + +
Sbjct: 329 LANISYIYAKLEVHDYTAFTTKHQYLMTTLY---------EVIGIEQAKVMLMPFYSLTN 379
Query: 356 ELEKKYIFKTVLAYVTEA-FLFHSVEEV 436
E +K+ I K ++ YVT F F+ +
Sbjct: 380 EDDKELILKAIIRYVTSVLFSFNQTNSI 407
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,150,892
Number of Sequences: 1657284
Number of extensions: 15316795
Number of successful extensions: 42712
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42697
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -