Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00965
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   0.24 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.93 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   3.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect(2) = 0.24
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 64  HHIHAAHHAL 93
           HHIHA HH +
Sbjct: 328 HHIHAQHHVV 337



 Score = 21.4 bits (43), Expect(2) = 0.24
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 58  QFHHIHAAHH 87
           Q HH HA HH
Sbjct: 320 QNHHHHAGHH 329


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 555 IITLHNVSYAFCIIY*SSTIQPPSAYG 475
           +I  + + +AFC  Y S +I+P S  G
Sbjct: 543 LIQFNTIVFAFCYCYYSISIRPISTLG 569


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 760 HTTILVQCYAQNVVPYLQ 707
           H ++L +CY  + +P+LQ
Sbjct: 87  HLSVLHKCYDYDAIPWLQ 104


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 255 LVVFIYL*CQMLNLKSLVSEMWKKCKRNSMMLLMNW 362
           L++ + L   + N    V   W +C+   ++ L+NW
Sbjct: 57  LILLMVLVNLIFNTCGEVFSAWVRCQDQILIFLVNW 92


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 549 TLHNVSYAFCI 517
           T H ++YAFC+
Sbjct: 274 TAHMINYAFCV 284


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 496 TTTKCIRDIRLYF 458
           TT + IRD+ LYF
Sbjct: 11  TTLRLIRDLSLYF 23


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 549 TLHNVSYAFCI 517
           T H ++YAFC+
Sbjct: 274 TAHMINYAFCV 284


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -1

Query: 550 YSSQCQLCFLYHILIFDNTTTKCIRDIRLYFFQIIQEDNFFHR 422
           Y+  C LCFL    +     T  + +     FQ+  E  + H+
Sbjct: 271 YNRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQVF-ESFYLHK 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,218
Number of Sequences: 336
Number of extensions: 4525
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)