Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00965
         (802 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-P...    30   4.2  
AY122249-1|AAM52761.1|  399|Drosophila melanogaster SD05592p pro...    29   9.8  
AE014297-801|AAF54278.1|  397|Drosophila melanogaster CG8159-PA ...    29   9.8  

>AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-PA
           protein.
          Length = 2030

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +3

Query: 285 MLNLKSLVSEMWKKCKRNSMMLL 353
           M NL S+V EM+++C RN++ LL
Sbjct: 291 MWNLLSIVREMYRRCDRNAVRLL 313


>AY122249-1|AAM52761.1|  399|Drosophila melanogaster SD05592p
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 761 THDNFSAMLCSKCGTIFANSFI 696
           TH N    +C++CG  F NS+I
Sbjct: 269 THTNDRPFICAQCGKSFTNSYI 290


>AE014297-801|AAF54278.1|  397|Drosophila melanogaster CG8159-PA
           protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 761 THDNFSAMLCSKCGTIFANSFI 696
           TH N    +C++CG  F NS+I
Sbjct: 269 THTNDRPFICAQCGKSFTNSYI 290


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,407,449
Number of Sequences: 53049
Number of extensions: 746427
Number of successful extensions: 2180
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)