Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00965
         (802 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g09540.1 68418.m01105 DNAJ heat shock N-terminal domain-conta...    30   1.6  
At4g36990.1 68417.m05241 heat shock factor protein 4 (HSF4) / he...    30   1.6  
At3g51910.1 68416.m05694 heat shock transcription factor family ...    30   1.6  
At2g23730.1 68415.m02833 expressed protein                             30   1.6  
At5g62020.1 68418.m07785 heat shock factor protein, putative (HS...    29   2.7  
At2g20670.1 68415.m02427 expressed protein contains Pfam profile...    29   3.6  
At3g54310.1 68416.m06002 hypothetical protein predicted protein,...    28   8.3  
At3g22970.1 68416.m02896 expressed protein contains Pfam profile...    28   8.3  

>At5g09540.1 68418.m01105 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 280

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +1

Query: 499 CRRLIYDTKSIADIVKSNNENVEFVSGSLVNVGLFLVPKDSNRSNFDSFSLILNSS 666
           CR+     K+    V+SN E V F S ++  VGL   P  SN S     S+    S
Sbjct: 198 CRKAFEAVKTQTPPVESNGEGVYFGSWAMFPVGLTSHPNTSNWSPISHLSVCTGQS 253


>At4g36990.1 68417.m05241 heat shock factor protein 4 (HSF4) / heat
           shock transcription factor 4 (HSTF4) identical to heat
           shock transcription factor 4 (HSF4) SP:Q96320 from
           [Arabidopsis thaliana]
          Length = 284

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +1

Query: 511 IYDTKSIADIVKSNNENVEFVSGSLVNVGLFLVPKDSNRSNFDSFSLILNSSEWAKARIQ 690
           + D  S  D+V  N E   FV          L+P+    +NF SF   LN+  + K    
Sbjct: 22  LVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPD 81

Query: 691 KSINEFAN 714
           K   EFAN
Sbjct: 82  KW--EFAN 87


>At3g51910.1 68416.m05694 heat shock transcription factor family
           protein contains Pfam profile: PF00447 HSF-type
           DNA-binding domain
          Length = 272

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = +1

Query: 517 DTKSIADIVKSNNENVEFVSGSLVNVGLFLVPKDSNRSNFDSFSLILNSSEWAKARIQKS 696
           D  +   IV  N     FV   L +    L+P+    SNF SF   LN+  + K   ++ 
Sbjct: 39  DDPNTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKHSNFSSFIRQLNTYGFRKIEAERW 98

Query: 697 INEFAN 714
             EFAN
Sbjct: 99  --EFAN 102


>At2g23730.1 68415.m02833 expressed protein
          Length = 220

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 670 WAKARIQKSINEFANMVPHFEHSIALKL 753
           WA  ++ +SINEF + + +  H I LKL
Sbjct: 120 WADMQLVRSINEFPDPIAYKSHKIGLKL 147


>At5g62020.1 68418.m07785 heat shock factor protein, putative (HSF6)
           / heat shock transcription factor, putative (HTSF6)
           identical to heat shock transcription factor 6 (HSF6)
           SP: Q9SCW4 from [Arabidopsis thaliana] ;contains Pfam
           profile: PF00447 HSF-type DNA-binding domain
          Length = 299

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +1

Query: 511 IYDTKSIADIVKSNNENVEFVSGSLVNVGLFLVPKDSNRSNFDSFSLILNSSEWAK 678
           + +  SI D++  N +   F+  +  +    L+PK    +NF SF   LN+  + K
Sbjct: 31  LVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKK 86


>At2g20670.1 68415.m02427 expressed protein contains Pfam profile
           PF04720: Protein of unknown function (DUF506)
          Length = 294

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 321 KKCKRNSMMLLMNWKKNTYLKLFWL 395
           KKC R+  M +  W+K+ Y++  WL
Sbjct: 218 KKCLRDKKMHMAPWRKHKYMQAKWL 242


>At3g54310.1 68416.m06002 hypothetical protein predicted protein,
           Arabidopsis thaliana
          Length = 358

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 541 VKSNNENVEFVSGSLVNVGLFLVPKDSNRSNFDSFSLILNSSEWAKARIQKSI 699
           V S N  + + +G +     FLV  D   SNF    L+  SSEW K   +KS+
Sbjct: 32  VGSTNTKIIYANGYISR--WFLVGSDPEDSNFQ---LVPGSSEWRKDAEEKSL 79


>At3g22970.1 68416.m02896 expressed protein contains Pfam profile
           PF04720: Protein of unknown function (DUF506)
          Length = 370

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +3

Query: 228 KMFLRPNPFLVVFIYL*CQMLNLKSLVSEMWKKCKRNSMMLLMNWKKNTYLKLFWLTS 401
           K+ L+  PF  +F+    ++  +  L+SE  K+  +   M    W+K  Y++  WL+S
Sbjct: 233 KVLLQSLPF--IFVGKSDRLSQIVFLISEAAKQSLKKKGMPFPPWRKAEYMRSKWLSS 288


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,104,479
Number of Sequences: 28952
Number of extensions: 353576
Number of successful extensions: 976
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)