Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00964
(427 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 34 0.042
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 32 0.22
06_01_0393 + 2831676-2831876,2831986-2832101,2832340-2832421,283... 30 0.68
06_01_1013 - 7931756-7935109 29 1.2
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 29 1.6
01_04_0117 + 16208669-16208753,16209508-16209869 29 1.6
03_02_0103 + 5640652-5641029,5641458-5641693,5642292-5642367,564... 29 2.1
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 2.7
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 28 3.6
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 28 3.6
09_04_0377 + 17086775-17088310 28 3.6
07_03_0069 + 13041063-13041577,13041647-13042231,13042285-13042540 27 4.8
06_01_0410 + 2928382-2930973 27 4.8
01_01_1152 + 9170628-9171899 27 4.8
12_02_0058 + 13015401-13016654 27 6.3
08_02_0092 + 12265446-12265809,12266147-12266743,12266792-122668... 27 6.3
04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814 27 6.3
03_05_1045 - 29914581-29914829,29914840-29916083,29919055-299191... 27 6.3
02_03_0119 - 15457691-15458687,15458768-15458934,15459019-15459123 27 6.3
01_06_1585 - 38448403-38448512,38448836-38448916,38449388-384494... 27 6.3
12_02_0744 - 22704637-22705341 27 8.3
07_03_1554 + 27659995-27660093,27661084-27661120,27661204-276612... 27 8.3
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 27 8.3
04_04_1216 + 31811403-31812267,31813187-31813877,31813981-318141... 27 8.3
03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688... 27 8.3
01_06_0508 - 29897536-29897982 27 8.3
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 34.3 bits (75), Expect = 0.042
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +1
Query: 112 RRSFGGDERRRSPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPI---AAHRAR 282
RRS G R RSPAR+ P PP P R R+ R R P+ ++HR R
Sbjct: 219 RRS--GRSRSRSPARDRGSPPRRRSPPARRERSPAP----RSRSPRRRSPVKTTSSHRER 272
Query: 283 VPPLRGGSLIEPSITTVPLEASMDAV 360
P R GS + ++ D V
Sbjct: 273 SPVRRNGSPRRSPVRSIGRSPQRDRV 298
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 31.9 bits (69), Expect = 0.22
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +1
Query: 103 GGERRSFGGDERRRSPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIAAHRAR 282
GG+ RS G R S +R S PP H R L P R +SR P A+ +
Sbjct: 731 GGKLRSHGDRSRSMSRSRSLSGSRSRSPPPIHNRSPLASLSPKRESNAKSRSPSASSEGK 790
>06_01_0393 +
2831676-2831876,2831986-2832101,2832340-2832421,
2832515-2832671,2832755-2832848,2833942-2834008,
2834464-2835009
Length = 420
Score = 30.3 bits (65), Expect = 0.68
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 124 GGDERRRSPARESYRKPSGXXPPRHPRIGTRPLR 225
GG RRR E Y +P G P HP I + LR
Sbjct: 6 GGRRRRRPAVEERYTRPQGLYP--HPDIDLKKLR 37
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/79 (29%), Positives = 32/79 (40%)
Frame = +1
Query: 88 RQENYGGERRSFGGDERRRSPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIA 267
+Q+ RR+ GG +RR P +E +PS PP P+ R T R+ P
Sbjct: 67 QQQQRRPRRRNHGGGGQRRGPPQE---RPSAAPPPPPPQQQQRQQHAAPAPT-RAAAPAP 122
Query: 268 AHRARVPPLRGGSLIEPSI 324
A A GG P +
Sbjct: 123 ARVAATKAAAGGDGAVPQL 141
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = +1
Query: 118 SFGGDERRRSPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIAAHRARVPPLR 297
+ G + R P+ E R P PP P + RP P R P+ P
Sbjct: 15 TLGKRKERDRPSSEEQRAPPPPPPPLFPAMSARPQPPRPAHPARFVKPMPPPPPPFPKGG 74
Query: 298 GGS 306
GGS
Sbjct: 75 GGS 77
>01_04_0117 + 16208669-16208753,16209508-16209869
Length = 148
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = -2
Query: 273 VCRDRMPRAQSAATEGAERAGADARVSRGXXTAWFAVAFSGGRSSSFIPTEGPPFASVI 97
V + R PR G R GADA V A AV +G R + EG P ++
Sbjct: 14 VGKKRGPRRHFIGCGGEGRRGADAVVLAAVMAASLAVFLAGWRHYRYRVLEGSPLTPLV 72
>03_02_0103 +
5640652-5641029,5641458-5641693,5642292-5642367,
5642450-5642526,5642672-5642702,5642798-5642950,
5643259-5643300,5643372-5643440,5643645-5643752
Length = 389
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +1
Query: 127 GDERRRSPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIAAHRARVPPLRGGS 306
G+ R A ++ R+P P R P + P SR P AA +R P GGS
Sbjct: 42 GEASREPDAGQASREPGAAGPSREPDVAGPSREPDAAGP--SREPGAAGGSREPGAAGGS 99
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 2.7
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +1
Query: 139 RRSPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIAAHRARVPPLRGGSLIEP 318
R+ P ++R P PP + +P P R + I R PP R +
Sbjct: 107 RKPPPPPTHRDPKPSLPPTTTQRDPKPSPPQHKAPERPQLVIPGANNRPPP-RPEPMPGL 165
Query: 319 SITTVPLEASMDAVPSNPK--KKHPQLK 396
T P +S P P+ +K P+LK
Sbjct: 166 KKTAAPSSSSASVPPERPRALEKKPKLK 193
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 112 RRSFGG-DERRRSPARESYRKPSGXXPPRHPRI 207
RR GG +ERRRSP R+ P PP P +
Sbjct: 170 RRDRGGREERRRSPDRKEPTPPLPPPPPLLPEL 202
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 27.9 bits (59), Expect = 3.6
Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Frame = +1
Query: 97 NYGGERR--SFGGDER--RRSPARESYRKPSGXXPPRHPR----IGTRPLRPFR-GRTLR 249
N GER ++G R RR P RKP G PP R +G RP P R G+ L
Sbjct: 404 NLTGERPRIAYGKPRRPPRRPPGLARPRKPLGRRPPGPARPGKPLGRRPPGPARPGKPLG 463
Query: 250 SRHPIA-AHRARVP 288
R A R R+P
Sbjct: 464 RRPDFARTRRWRLP 477
>09_04_0377 + 17086775-17088310
Length = 511
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 145 SPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIAAHRARVPP 291
SP+ R PS PR R R P+R R RS P R + P
Sbjct: 23 SPSPRRRRSPSRSPSPRRNRRRDRSPSPYRSRRDRSPSPYRDRRRQWSP 71
>07_03_0069 + 13041063-13041577,13041647-13042231,13042285-13042540
Length = 451
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 199 PRIGTRPLRPFRGRTLRSRHPIAAHRARVPPLRGGSLIEPSITTVPLEASMDAVPSNPKK 378
PR+ +P P RT+ S HP A+ PP G +P+ + + +++ P N
Sbjct: 312 PRL--QPRAPRAPRTVPSSHPGASSSPAPPPPHG---YDPNASFILTMLTLECNPMNTST 366
Query: 379 KHPQL 393
+H L
Sbjct: 367 RHEAL 371
>06_01_0410 + 2928382-2930973
Length = 863
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 319 SITTVPLEASMDAVPSNPKKKHPQLKKIGMLTT 417
S TT+ LE S +A P+N H L K+GM TT
Sbjct: 263 SPTTIALEVSAEAGPTN----HVDLAKLGMGTT 291
>01_01_1152 + 9170628-9171899
Length = 423
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 229 FRGRTLRSRHPIAAHRARVPPLRGGSLIEPSITT-VPLEASMDAVPSNPKKKHPQLKKIG 405
F+G HP A A L GG++ P +TT +P E + A P K P K +G
Sbjct: 198 FKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLP-YKNVG 256
>12_02_0058 + 13015401-13016654
Length = 417
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 187 PPRHPRIGTRPLRPFRGRTLRSRHP 261
PPRHP I T P PF L P
Sbjct: 258 PPRHPPIQTYPTDPFESAPLDPFEP 282
>08_02_0092 +
12265446-12265809,12266147-12266743,12266792-12266861,
12267325-12267427
Length = 377
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 151 ARESYRKPSGXXPPRHPRIGTRPLRPFRGRTL 246
A + YR+P P P+ +RP+ PF G ++
Sbjct: 76 AAKFYREPPPPTSPAPPQCPSRPIPPFAGPSI 107
>04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814
Length = 775
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 118 SFGGDERRRSPA-RESYR-KPSGXXPPRHPRIGTRPLR 225
S GG RRRSP+ R +R PS P R R RP R
Sbjct: 20 SSGGRYRRRSPSPRRHHRAPPSNPNPHRDRRTPDRPRR 57
>03_05_1045 -
29914581-29914829,29914840-29916083,29919055-29919199,
29919727-29919792,29919882-29920108,29920204-29920310,
29920428-29920502,29920600-29920688,29920768-29920848,
29921631-29921702,29922056-29922178
Length = 825
Score = 27.1 bits (57), Expect = 6.3
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Frame = +1
Query: 175 SGXXPPRHPRIGTRPLRPF----RGRTLRSRHPIAAHRARVPPLRGGS-LIEPSITTVP- 336
+G PPRHP + L F R HP+ A R + L S L P + P
Sbjct: 392 AGLLPPRHPDLSLVALNSFLRVLSRRASSPAHPLLAFRLLLLMLSPASPLPPPDHLSFPF 451
Query: 337 -LEASMDAVPSNPKKKHPQLKKIGM 408
L A+ PS + H L K G+
Sbjct: 452 ALSAAAAVSPSPGTQLHALLVKNGL 476
>02_03_0119 - 15457691-15458687,15458768-15458934,15459019-15459123
Length = 422
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 154 RESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIAAHRARVPPLRG 300
RE+ + P+ R PLR R R +S+ A A PP RG
Sbjct: 155 REAPKTPNPVTRTRKVNAEATPLRARRAREKQSQRGTARAEASTPPSRG 203
>01_06_1585 -
38448403-38448512,38448836-38448916,38449388-38449475,
38449571-38449666,38449823-38449879,38449960-38450466,
38450701-38451393,38451612-38451683
Length = 567
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 88 RQENYGGERRSFGGDERRRSPARESYRKPSGXXPPRHPRIGTR-PLRPFRGR 240
R + +R S G ER R ARES +KP+ PR P R P+ R R
Sbjct: 306 RPSSASSQRPSVG--ERHRI-ARESIKKPADVSTPRRPSTAERHPVTTERAR 354
>12_02_0744 - 22704637-22705341
Length = 234
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 318 LNYNRAFRSLHGRSSIKSKEEASSTEEDWDADDKEE 425
L + R+F++LH R + +EE EE+ +ADD E
Sbjct: 15 LRWRRSFKNLHLRELLDEEEE----EEEAEADDAVE 46
>07_03_1554 +
27659995-27660093,27661084-27661120,27661204-27661280,
27662272-27662342,27662512-27662590,27662726-27662828,
27662963-27663082,27663180-27663257,27663416-27663471,
27663588-27663657,27664179-27664266,27664503-27664800,
27664943-27665158,27665521-27665841,27666054-27666103,
27666493-27666553,27666633-27666716,27666926-27667039,
27667134-27667300,27667559-27667628,27668328-27668507,
27668619-27668807
Length = 875
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 220 LRPFRGRTLRSRHPIAAHRA 279
++PF GR LR H +A+H A
Sbjct: 305 VKPFFGRILRMMHTVASHTA 324
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = +1
Query: 115 RSFGGDERRRSPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRHPIAAHRARVPPL 294
R F DER A + R+P+ P P P R G R A A V P
Sbjct: 83 RHFDEDERTPFEAASTPRRPAPSPPSFAPSPAAGPTRSGPGNAWGPRREAAPTAAPVSPA 142
Query: 295 RGG 303
G
Sbjct: 143 ASG 145
>04_04_1216 +
31811403-31812267,31813187-31813877,31813981-31814131,
31814289-31814351,31814590-31814664,31814934-31815032
Length = 647
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 103 GGERRSFGGDERRRSPARESYRKP 174
G + S GG+ERRR R SY P
Sbjct: 70 GIDSGSDGGEERRREEQRRSYEAP 93
>03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,
68871-69005,69131-69310,69495-69701,69821-69943,
70240-70359,70758-70880,72067-72171,72254-72398,
73443-73607,73669-73907,74452-74484,74977-75058,
75200-75360,75739-75951,76789-76971,77051-77220,
77375-77474
Length = 1021
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 339 RSLHGRSSIKSKEEASSTEEDWDADD 416
R+LHG S S+E+A+STE + A++
Sbjct: 955 RTLHGLQSAASREKAASTELNQMAEE 980
>01_06_0508 - 29897536-29897982
Length = 148
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -3
Query: 350 MEASKGTVVIEGSISEPPRKGG--TRARCAA 264
+ A +G V EG++ PP + G T++RCAA
Sbjct: 61 LPAPEGVPVDEGAMPPPPPRHGAKTKSRCAA 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,595,979
Number of Sequences: 37544
Number of extensions: 208121
Number of successful extensions: 1073
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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