Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00964
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   3.3  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.6  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 337 LEASMDAVPSNPKKKHPQLKK 399
           L+  +D VP++   +HP  KK
Sbjct: 114 LKVILDFVPNHSSHEHPWFKK 134


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = +1

Query: 145 SPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRH 258
           S +     K     PP HP  G++ L    G     +H
Sbjct: 84  STSPSGQNKAVAPYPPNHPLSGSKHLCSICGDRASGKH 121


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = +1

Query: 145 SPARESYRKPSGXXPPRHPRIGTRPLRPFRGRTLRSRH 258
           S +     K     PP HP  G++ L    G     +H
Sbjct: 84  STSPSGQNKAVAPYPPNHPLSGSKHLCSICGDRASGKH 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,723
Number of Sequences: 438
Number of extensions: 1685
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)