Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00963
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.9  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 393 YFFCSPKTIRHLTFK*LISQIKNTN 319
           YFFCSP   +   F+ LI  +   N
Sbjct: 345 YFFCSPHPHKVYDFELLIKGVYQVN 369


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 546 YASKSTKKNDSNICQFLFF*KLLYGFRMLKV 638
           Y  +  +KN ++IC+ +     +YG  ML++
Sbjct: 217 YDLRRVRKNYNSICELVDAFNNIYGLAMLEI 247


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 470 NNSNIQTLTVTINIKKYNKNATCAIHIFFVLRKLSD 363
           NN+NI+      N K+ N N       FFV  K ++
Sbjct: 204 NNNNIELYKEIFNGKRKNPNGCDIKATFFVSHKYTN 239


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 464 SNIQTLTVTINIKKYN 417
           SN+ +LT+T+  KK+N
Sbjct: 148 SNVNSLTLTLKRKKWN 163


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 464 SNIQTLTVTINIKKYN 417
           SN+ +LT+T+  KK+N
Sbjct: 74  SNVNSLTLTLKRKKWN 89


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/58 (22%), Positives = 24/58 (41%)
 Frame = +2

Query: 320 FVFLICEINYLNVKCLIVFGEQKKYVLHTSRFCCTF*CLL*R*VFECCYYSIELALML 493
           + F+I  ++ L + C+  F     ++L    F C F       +F  C Y    A ++
Sbjct: 118 YAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFII 175



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 171 VPIYTYVCVLTRTCAYLYVHVH 106
           VP++  +C+    CA++   VH
Sbjct: 138 VPLFFLLCIYYFYCAFIIFTVH 159


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 116 YMCIRTRACXVRIRTWTI 63
           Y+C +TRA  + +  W I
Sbjct: 180 YICTKTRASLICLLAWFI 197


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 116 YMCIRTRACXVRIRTWTI 63
           Y+C +TRA  + +  W I
Sbjct: 180 YICTKTRASLICLLAWFI 197


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249 KCHMNHHIVNTVHS 290
           KC + +HI NTV S
Sbjct: 153 KCGIQYHICNTVIS 166


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249 KCHMNHHIVNTVHS 290
           KC + +HI NTV S
Sbjct: 149 KCGIQYHICNTVIS 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,882
Number of Sequences: 336
Number of extensions: 3828
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)