Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00961
         (652 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g46340.1 68418.m05704 O-acetyltransferase-related similar to ...    29   3.5  
At3g06550.1 68416.m00761 O-acetyltransferase-related similar to ...    28   6.2  

>At5g46340.1 68418.m05704 O-acetyltransferase-related similar to
           O-acetyltransferase [Homo sapiens] GI:17016934
          Length = 540

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +1

Query: 145 YYVNK*RMLSLFLQLIWKL-F*SHYGY*VTN*QYLFWSFCDVPKINIALIF--LFIFGKY 315
           YYV K   ++ F Q++W+L F   +   V N  Y+ +  C +  +   +++  L IF KY
Sbjct: 221 YYVRKDFSVARFAQMMWRLNFFVAFCCIVLNNDYMLYYICPMHTLFTLMVYGALGIFSKY 280


>At3g06550.1 68416.m00761 O-acetyltransferase-related similar to
           O-acetyltransferase (GI:17063556) [Cryptococcus
           neoformans var. neoformans]; contains 7 transmembrane
           domains
          Length = 419

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query: 145 YYVNK*RMLSLFLQLIWKL-F*SHYGY*VTN*QYLFWSFCDVPKINIALIF--LFIFGKY 315
           YY+ K   L+ F Q++W+L F   +   V N  Y+ +  C +  +   +++  L I  KY
Sbjct: 223 YYIRKDFSLARFAQMMWRLNFLVIFSCIVLNNSYMLYYICPMHTLFTLMVYGALGIMSKY 282


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,518,811
Number of Sequences: 28952
Number of extensions: 199590
Number of successful extensions: 323
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)