Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00960
(721 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00006CFE90 Cluster: hypothetical protein TTHERM_0069... 38 0.25
UniRef50_A0BUG9 Cluster: Chromosome undetermined scaffold_129, w... 38 0.33
UniRef50_Q7RSN1 Cluster: Putative uncharacterized protein PY0032... 36 1.0
UniRef50_Q8I5G0 Cluster: Putative uncharacterized protein; n=7; ... 36 1.3
UniRef50_Q4A9N1 Cluster: Neutrophil activating factor; n=5; Myco... 35 1.8
UniRef50_A5I5F3 Cluster: Putative uncharacterized protein; n=3; ... 35 2.3
UniRef50_Q1ETH2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q8IIW4 Cluster: Putative uncharacterized protein; n=8; ... 34 3.1
UniRef50_Q54CZ7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q4Y291 Cluster: Putative uncharacterized protein; n=2; ... 34 3.1
UniRef50_Q92240 Cluster: Nitrate transporter; n=2; Saccharomycet... 34 3.1
UniRef50_A5K8Z8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A2DVD3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q8XJJ9 Cluster: Sensor protein; n=3; Clostridium perfri... 33 5.4
UniRef50_Q8I1W5 Cluster: Putative uncharacterized protein PFD032... 33 5.4
UniRef50_Q4YXY6 Cluster: Putative uncharacterized protein; n=2; ... 33 5.4
UniRef50_O96422 Cluster: Asparagine-rich protein; n=3; Eukaryota... 33 5.4
UniRef50_UPI0000499BF2 Cluster: conserved hypothetical protein; ... 33 7.1
UniRef50_Q6F1B3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q8IAP1 Cluster: Putative uncharacterized protein MAL8P1... 33 7.1
UniRef50_Q7RSE9 Cluster: Putative uncharacterized protein PY0041... 33 7.1
UniRef50_A7AQD0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A6H1H4 Cluster: Probable modification methyltransferase... 33 9.4
UniRef50_Q8IK94 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q5DG27 Cluster: SJCHGC08527 protein; n=1; Schistosoma j... 33 9.4
>UniRef50_UPI00006CFE90 Cluster: hypothetical protein TTHERM_00691950;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00691950 - Tetrahymena thermophila SB210
Length = 1510
Score = 37.9 bits (84), Expect = 0.25
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 20 INVKKNSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVN----ILNVSRD 187
IN KK+ N IK G + NNP +K +T+A + +N N SRD
Sbjct: 891 INYKKDQETQGNTHRNAIKEEGSQSQGIKNNNPS-NKKITKASNSKIMNGGESYTNSSRD 949
Query: 188 NSNFNKNLRHSLLTYIRNVCQVHQRNI 268
N N N S + + + V H ++I
Sbjct: 950 AINSNSNSNPSAIAHTQTVSHQHSQSI 976
>UniRef50_A0BUG9 Cluster: Chromosome undetermined scaffold_129, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_129, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1411
Score = 37.5 bits (83), Expect = 0.33
Identities = 23/74 (31%), Positives = 43/74 (58%)
Frame = -1
Query: 661 DIIS*HLFSKILSIVDLILMDILSKIQSLLEQSSFHNLFRTFKFLSVRFQCIYSHK*IQF 482
D+I ++F K +++ ++ DI + L E +S+ N F F L +R++CI SHK +
Sbjct: 1236 DVIRIYIFEKKITLDHDLIFDITHTYKRLKEFTSYQN-FMKF-LLEIRYKCIPSHK---Y 1290
Query: 481 LYYVHSSSSELGSL 440
L+Y + +E+ S+
Sbjct: 1291 LFYKMMNFAEVDSV 1304
>UniRef50_Q7RSN1 Cluster: Putative uncharacterized protein PY00324;
n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00324 - Plasmodium yoelii yoelii
Length = 525
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 29 KKNSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRA--LSKNFVNILNVSRDNSNFN 202
KK +M ++ KVIK NGD+ +L+ K ++++ L KN V N++ SN
Sbjct: 134 KKKKKMKNDMNGKVIKKNGDLTNELIDKKKSASKNISKSFNLKKNNVISSNIN-ITSNTK 192
Query: 203 KNLRH 217
KN +H
Sbjct: 193 KNYKH 197
>UniRef50_Q8I5G0 Cluster: Putative uncharacterized protein; n=7;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1501
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 334 SQNLKETDKCLDIFLIKEMKSMGINSIFDCDNADMEVIQALMNLNEHSTK-IEFIYENI 507
+ N K+ DK DI IK + +NSI D +N DM I + N+N+++ K + I +NI
Sbjct: 882 NDNNKKKDKHKDINNIKYNNNKDMNSINDNNNKDMNNINDMNNINDNNNKDMNNINDNI 940
>UniRef50_Q4A9N1 Cluster: Neutrophil activating factor; n=5;
Mycoplasma hyopneumoniae|Rep: Neutrophil activating
factor - Mycoplasma hyopneumoniae (strain J / ATCC 25934
/ NCTC 10110)
Length = 145
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +3
Query: 510 HWNLTDKNLKVLNKLWNEDCSSKDWILDSISIKIKSTIERILLNKCHEIISQSN 671
HWNL DK+ VL+K ++ + +D+I+ K++S +I L EII S+
Sbjct: 23 HWNLQDKDFLVLHKFSDKLAQKTNNFIDNIAEKLRS-FGKIALANFEEIIQNSD 75
>UniRef50_A5I5F3 Cluster: Putative uncharacterized protein; n=3;
Clostridium botulinum A|Rep: Putative uncharacterized
protein - Clostridium botulinum A str. ATCC 3502
Length = 803
Score = 34.7 bits (76), Expect = 2.3
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 17 NINVKKNSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILNVSRDNSN 196
NIN+ K+S + K+ +N DV + YN L D + ++L K + L S DN+N
Sbjct: 189 NINLLKDS------LKKIDFSNYDVIHNFCYN--LKDLNILKSLKKPMIYYLPSSIDNNN 240
Query: 197 FNKNLRHSLLTYIRNVC 247
+ K+ H ++ N C
Sbjct: 241 YFKSFTHDIINEKLNNC 257
>UniRef50_Q1ETH2 Cluster: Putative uncharacterized protein; n=1;
Clostridium oremlandii OhILAs|Rep: Putative
uncharacterized protein - Clostridium oremlandii OhILAs
Length = 344
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 23 NVKKNSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILNVSRDNSNFN 202
N K+ + N I +I N +V PD N L K +T ++N ++ + + + FN
Sbjct: 63 NFNKSIARSRNRIFDIIACNVNVLPDY-EGNIQLPKFLTLTFAENITDLQTANAEFTTFN 121
Query: 203 KNLRHSLLTYIRNV 244
K L + L +NV
Sbjct: 122 KRLSYHLYKTNKNV 135
>UniRef50_Q8IIW4 Cluster: Putative uncharacterized protein; n=8;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3371
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 17 NINVKKNSRMNTNLIIKVIKTNGDVCPDLLYNN--PLLDKTVTRALSKNFVNILNVSRDN 190
+IN +S +N N+I+K N ++ ++ N P+ +K + + N NILN N
Sbjct: 355 HINNDISSNINDNIILKNKNMNNNINSNIFNTNHFPITNKN-NISYNNNICNILNNENSN 413
Query: 191 SNFNKN 208
+N N N
Sbjct: 414 NNINNN 419
>UniRef50_Q54CZ7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 500
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/59 (23%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Frame = +3
Query: 516 NLTDKNLKVLNKLWNEDCSSKDWILD----SISIKIKSTIERILLNKCHEIISQSNSIN 680
N +++L++LN++ N +C + +++ +I++ + + ++++NKCH ++ NS N
Sbjct: 292 NQENEDLEILNEIINNNCENTSKLIEIIFKNINLLKNNKLRKLIINKCHSDDNEFNSPN 350
>UniRef50_Q4Y291 Cluster: Putative uncharacterized protein; n=2;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 873
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +1
Query: 250 SSPKEHIKTDENVMNLVNDVYLRALESKSQNLKETDKCLDIFLIKEMKSMGINSIFDCDN 429
S+P + + + N D ++ ++ + +KE D L+ +E + N+ +D DN
Sbjct: 516 STPSSNSGNNNSDNNKAQDDAIKGKDTDFRKIKEFDSILNSLSYRENNEINENNFYDNDN 575
Query: 430 ADMEVIQALMNLNEHSTKIEF 492
+D+ ++ + +T IE+
Sbjct: 576 SDIIILDDYDDTRVGNTNIEY 596
>UniRef50_Q92240 Cluster: Nitrate transporter; n=2;
Saccharomycetaceae|Rep: Nitrate transporter - Pichia
angusta (Yeast) (Hansenula polymorpha)
Length = 508
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 573 SKDWILDSISIKIKSTIERILL--NKCHEIISQSNSINLDEIFEDTDLNDL 719
SK+ L S+ ++ + I+++++ N+ EI+ ++ IN DEI ED LND+
Sbjct: 252 SKEGELTSVFVEPVNAIDKVVVEPNQDQEILEVADIINGDEIIEDPSLNDV 302
>UniRef50_A5K8Z8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 816
Score = 33.9 bits (74), Expect = 4.1
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = +2
Query: 35 NSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILNVSRDNSNFNKNLR 214
++ +N I KV+ + +C LL L+D+T + S+NF N + + NSN N ++
Sbjct: 489 HTEINIEKISKVVHSAQVLCNKLLRQKSLVDQTGSN--SRNFTNFIPMYNTNSN-NLRMK 545
Query: 215 HSLLTYIRNVCQVHQRNI 268
++ L Y + +H R I
Sbjct: 546 YANL-YENKMNAIHSRPI 562
>UniRef50_A2DVD3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1426
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 525 R*DSSVYILINEFNFCTMFIQVHQSLDHFHISIITVEN*IYTHRFHFLN 379
R D+ YI I +FN C + + L H++ S+ + E I T R+ F N
Sbjct: 853 RNDTVRYIAITKFNICQILPEKLSELLHYYCSVFSTEGIIVTLRYWFEN 901
>UniRef50_Q8XJJ9 Cluster: Sensor protein; n=3; Clostridium
perfringens|Rep: Sensor protein - Clostridium
perfringens
Length = 571
Score = 33.5 bits (73), Expect = 5.4
Identities = 27/101 (26%), Positives = 51/101 (50%)
Frame = +1
Query: 217 FVADIHS*RMPSSPKEHIKTDENVMNLVNDVYLRALESKSQNLKETDKCLDIFLIKEMKS 396
F+A + S + S ++++ +NV+N N V LE+ + N+K + ++ +MK+
Sbjct: 16 FLAIMTSMYLVISNHKYLEESKNVLNEYNKVIALLLENDNGNIKSELERIE--SNNDMKN 73
Query: 397 MGINSIFDCDNADMEVIQALMNLNEHSTKIEFIYENIYTGI 519
+ I I N + + L+N NE K + I E I +G+
Sbjct: 74 IRITYISKDGNVIFDTHKKLINDNESYLKRQEIIEAIESGL 114
>UniRef50_Q8I1W5 Cluster: Putative uncharacterized protein PFD0320c;
n=4; cellular organisms|Rep: Putative uncharacterized
protein PFD0320c - Plasmodium falciparum (isolate 3D7)
Length = 2228
Score = 33.5 bits (73), Expect = 5.4
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +2
Query: 17 NINVKKNS----RMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVN-ILNVS 181
N N+K N+ ++NTNLI + D D + N+ + D + ++ N +N +N +
Sbjct: 987 NTNIKINTNIKIKINTNLITNINDNINDNINDNIINDNINDNIINDNINDNIINDNINDN 1046
Query: 182 RDNSNFNKNLRHSLLTYIRN 241
+ N N N N + ++ +N
Sbjct: 1047 KINDNINDNKINDVINDNKN 1066
>UniRef50_Q4YXY6 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 1055
Score = 33.5 bits (73), Expect = 5.4
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 32 KNSRMNTNL--IIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILNVSRDNSNFNK 205
KN+ T L +I++ + +L N ++ T++ L +N N+ + N NK
Sbjct: 869 KNNHAITKLRDVIRITNNKTKIIYHMLSNFKVMQNTISLLLKYIMINEKNMK--DLNKNK 926
Query: 206 NLRHSLLTYIRNVCQVHQRN 265
N H++L ++NVC N
Sbjct: 927 NQIHNILKILKNVCLTQFNN 946
>UniRef50_O96422 Cluster: Asparagine-rich protein; n=3;
Eukaryota|Rep: Asparagine-rich protein - Plasmodium
falciparum
Length = 728
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +2
Query: 17 NINVKKNSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILNVSRDNSN 196
N+N K +N ++ I N + NN +V + N + +LN++++N+N
Sbjct: 518 NLNSVKGVSLNEKQLLNYINNNNNNSSSSSNNNMSGIPSVNSNIDTNLLTLLNMTKNNNN 577
Query: 197 FNKNLRHSLLTYIRNV 244
N N ++ YI N+
Sbjct: 578 NNNNDNNN-NNYINNI 592
>UniRef50_UPI0000499BF2 Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 539
Score = 33.1 bits (72), Expect = 7.1
Identities = 10/30 (33%), Positives = 23/30 (76%)
Frame = +2
Query: 146 LSKNFVNILNVSRDNSNFNKNLRHSLLTYI 235
+S+N++N++ + R+N+ + + +HSL+T I
Sbjct: 437 VSENYINLIRLIRENTKYKEETKHSLITQI 466
>UniRef50_Q6F1B3 Cluster: Putative uncharacterized protein; n=1;
Mesoplasma florum|Rep: Putative uncharacterized protein
- Mesoplasma florum (Acholeplasma florum)
Length = 234
Score = 33.1 bits (72), Expect = 7.1
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 516 NLTDKNLKVLNKLWNEDCSSKDWILDSISIKIKSTIERILLNKCHEIISQS-NSINLDEI 692
+L D N++ K ED +LDS ++ I E++ LN EI+ + NSIN D I
Sbjct: 144 SLVDFNIERRFKKIREDIELSSNLLDSQNLFINE-FEKLNLNDKKEILEKLLNSINFDSI 202
Query: 693 FEDTDLNDL 719
E D++++
Sbjct: 203 LEMHDIDEI 211
>UniRef50_Q8IAP1 Cluster: Putative uncharacterized protein MAL8P1.139;
n=3; root|Rep: Putative uncharacterized protein
MAL8P1.139 - Plasmodium falciparum (isolate 3D7)
Length = 5910
Score = 33.1 bits (72), Expect = 7.1
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 17 NINVKKNSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILN-VSRDNS 193
N+N K ++ N N+ K+ N +Y N + + K +NI++ V D
Sbjct: 1240 NVNKKNDTLYNKNVNTKIKLDNN------IYINKVKSDILLIEGHKE-INIIDYVIDDFY 1292
Query: 194 NFNKNLRHSLLTYIRNVCQVHQRNILRPMK 283
+NKN+ H+LL I+ V VH+ N L K
Sbjct: 1293 IYNKNIEHNLLLIIKYVYTVHKNNNLHNKK 1322
>UniRef50_Q7RSE9 Cluster: Putative uncharacterized protein PY00410;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00410 - Plasmodium yoelii yoelii
Length = 1510
Score = 33.1 bits (72), Expect = 7.1
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 113 NPLLDKTVTRALSKNFV-NILN-VSRDNSNFNKNLRHSLLTYIRNVCQVHQRNI 268
N L K +T+ KN + NI+N +S+ N+N N N R++L YI + + Q NI
Sbjct: 1297 NLFLPKKLTK--KKNILHNIINNISKYNTNINNNKRNTLFKYILSRVKKEQNNI 1348
>UniRef50_A7AQD0 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 707
Score = 33.1 bits (72), Expect = 7.1
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 376 LIKEMKSMGINSIFDCDNADM-EVIQALMNLNEHSTKIEFIYENIYTGILP 525
L+ E++S+ I S FD NA + EV+ +L +NE + ++ YEN+ G+ P
Sbjct: 206 LLPELRSL-ILSYFDETNAGIDEVLYSLRRVNELAITLDLAYENVDEGMEP 255
>UniRef50_A6H1H4 Cluster: Probable modification methyltransferase;
n=1; Flavobacterium psychrophilum JIP02/86|Rep: Probable
modification methyltransferase - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 754
Score = 32.7 bits (71), Expect = 9.4
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +2
Query: 23 NVKKNSRMNTNLIIKVIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILNVS--RDNSN 196
N KN + + I IK C +L NN +L+ +TR L+ N+ +D +
Sbjct: 191 NTYKNIQAPSKEEISTIKITILECHNL--NNAILE-AITRQLADKINNLSKGYSWKDRFS 247
Query: 197 FNKNLRHSLLTYIRNVCQVHQRNILRPMK 283
F KN+ +SLL Y + + ++ ++NI +P +
Sbjct: 248 FIKNVDYSLLEYKKIITKI-EKNIFKPFQ 275
>UniRef50_Q8IK94 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 2943
Score = 32.7 bits (71), Expect = 9.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 556 HNLFRTFKFLSVRFQCIYSHK*IQFLYYVHSSSSELGSLPYQHYHSRKLNLY 401
HN +K F +Y K +Q LYY+H +SSE + + + K+ +Y
Sbjct: 503 HNFLFLYKKFVNNFNTLYFEKILQDLYYIHLNSSEENFVTFT-FKCNKIGIY 553
>UniRef50_Q5DG27 Cluster: SJCHGC08527 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08527 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 32.7 bits (71), Expect = 9.4
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = -3
Query: 386 SLIKKISRHLSVSFKFCDLLSRALK*TSLTKFITFSSVLICSFGELGIRYECMSATNVSN 207
SL KK+ +HLS ++ R+++ +T+ + FS+++ + E GI E + T++ N
Sbjct: 42 SLCKKVEKHLSEEENLFPVVWRSIQTEFITQCLRFSNLIQQCYPESGISLE-FTVTDLQN 100
Query: 206 FY 201
++
Sbjct: 101 YF 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,220,769
Number of Sequences: 1657284
Number of extensions: 11589596
Number of successful extensions: 38575
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 35327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38454
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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