Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00960
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.1  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    23   3.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.6  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 512 VYIFS*MNSIFV-LCSFKFIRAWITSISALSQSKIEFIPIDFISLIKKISRHLSVSFKFC 336
           VY F  +  + + L S  F  +WI   S LS   + ++P +  +  K+ISR L  + KF 
Sbjct: 319 VYYFISLGLLILRLVSVCFYGSWINEESKLSLDLLSYVPREVYN--KEISR-LVETLKFQ 375

Query: 335 DLLS 324
            + S
Sbjct: 376 SITS 379


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = +1

Query: 280 ENVMNLVNDVYLRALESKSQNLKETDKCL 366
           + + +++ D++ +   S  QNLK  ++C+
Sbjct: 24  QEMRDVLGDIHAKPTYSDLQNLKYLERCI 52


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 265 VPLVNLAYVTNVCQQRMSQIF 203
           +P+VN A  + V  QRM Q++
Sbjct: 481 LPMVNHAAASRVNIQRMKQVY 501


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 349 LLNFVTYFLGLLSKRH*LNS 290
           LL F+TYF  +L ++  LN+
Sbjct: 80  LLVFLTYFFNILFRKKLLNA 99


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 349 LLNFVTYFLGLLSKRH*LNS 290
           LL F+TYF  +L ++  LN+
Sbjct: 76  LLVFLTYFFNILFRKKLLNA 95


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 528 KNLKVLNKLWNEDCSS 575
           KN+  LN  W  +C S
Sbjct: 16  KNISALNGAWRWECKS 31


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/61 (18%), Positives = 27/61 (44%)
 Frame = +1

Query: 307 VYLRALESKSQNLKETDKCLDIFLIKEMKSMGINSIFDCDNADMEVIQALMNLNEHSTKI 486
           VY+      +Q L    +  D+       + G+ ++F C     ++I+ +  L++   K+
Sbjct: 59  VYITTNLRITQKLSIVTQLADLIFSASANASGVATVFFCLFYQNKLIEVISKLHKLDNKL 118

Query: 487 E 489
           +
Sbjct: 119 K 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,108
Number of Sequences: 336
Number of extensions: 3286
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)