Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00960
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81510-6|CAB04161.3| 327|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 30 1.9
AF024498-8|AAF39807.3| 305|Caenorhabditis elegans Serpentine re... 29 2.5
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 29 3.3
U41032-5|AAQ62460.1| 403|Caenorhabditis elegans Protein kinase ... 29 4.4
U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC087081-3|AAK66040.1| 240|Caenorhabditis elegans Hypothetical ... 28 5.8
Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical pr... 28 7.7
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z81510-6|CAB04161.3| 327|Caenorhabditis elegans Hypothetical
protein F21D9.2 protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.47
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = -1
Query: 613 LILMDILSKIQ--SLLEQSSFHNLFRTFKFLSVRFQCIYSHK*IQ-FLYYVHSSSSELGS 443
L L DI +I+ S + +SF F SV+ I K ++ FL YV +SE+
Sbjct: 119 LTLYDIAVRIRIISFITVASFFATLVFIIFSSVKLCSIEKEKRMKIFLRYVQKYASEIAV 178
Query: 442 LPYQHYHSRKLNLYP*ISFP*SKK-YLDIYQFLLNFVTYFL 323
PY + + +YP F +K Y +I LL F+ +L
Sbjct: 179 QPYIILLAVLICVYPETKFDDDEKLYYNIGAILLYFIVGYL 219
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 268 IKTDENVMNLVNDVYLRALESKSQNLKETDKCLDIFLIKEMKSMGINSIFDCDNADM 438
IKT +N + LVN VY K+ +L T KE K + +NS+F D+ D+
Sbjct: 261 IKTSDNQVYLVNPVYGTVEPGKTADLTITRNKAP---AKEAKLVIVNSVFSGDDKDL 314
>AF024498-8|AAF39807.3| 305|Caenorhabditis elegans Serpentine
receptor, class x protein105 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 658 IIS*HLFSKILSIVDLILMDILSKIQSLLEQSSFHN--LFRTFKFLSVRFQ 512
I S +F+ IL+I+ I + ILSK LL SF N R + FL FQ
Sbjct: 176 IFSLGVFTNILNILIAIKLFILSKYSKLLSSVSFQNRRKSRIYLFLQSCFQ 226
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 250 SSPKEHIKTDENVMNLVNDVYLRALESKSQNLKETDKCLDIFLIKEMKSMGINSIFDCDN 429
S P E +K + M+ V V LRA+ ++SQ LKE + + ++ + +M +FD +
Sbjct: 442 SIPIEELKIHPDAMSDVR-VKLRAILAESQELKEYAQKSIVAYLRSIYTMKDKKVFDVEA 500
Query: 430 AD 435
D
Sbjct: 501 ID 502
>U41032-5|AAQ62460.1| 403|Caenorhabditis elegans Protein kinase
protein 25, isoformc protein.
Length = 403
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 574 LEQSSFHNLFRTFKFLSVRFQCIYSHK*IQF 482
L Q S HN F TF+ LS R + +Y H+ + F
Sbjct: 120 LFQRSNHNPFNTFRSLSNRNKFVYRHQQLPF 150
>U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical
protein F09F7.5b protein.
Length = 582
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +1
Query: 244 MPSSPKEHIKTDENVMNLVNDVYLRALESKSQNLKETDKCLDIFLIKEMKSMGINSIFDC 423
M SS E+++T +NV++ VN+ Y S + L+ KE +G++ F
Sbjct: 37 MGSSEIENLRTSDNVIDTVNESYYIRPSSSNSTLRSQR--------KEKDRVGLDDAFPS 88
Query: 424 DNADMEVIQALMNLNEHSTKIEFI 495
+ E ++ + T ++I
Sbjct: 89 ASKSEEEVEVVRGYENQPTSHQYI 112
>AC087081-3|AAK66040.1| 240|Caenorhabditis elegans Hypothetical
protein Y82E9BL.16 protein.
Length = 240
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/83 (20%), Positives = 42/83 (50%)
Frame = -1
Query: 634 KILSIVDLILMDILSKIQSLLEQSSFHNLFRTFKFLSVRFQCIYSHK*IQFLYYVHSSSS 455
K+L +++ + ++ + + + N +TF+F S RF C + +++L+ + S
Sbjct: 104 KVLEDIEMWYTNTTNRFERIANLDQWKNA-KTFEFWSARFNCEH----LEYLFNLEEFSV 158
Query: 454 ELGSLPYQHYHSRKLNLYP*ISF 386
++G++ + + NL P +F
Sbjct: 159 KMGNVSVESAIRIRDNLLPRSTF 181
>Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical
protein Y48E1B.5 protein.
Length = 495
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 68 VIKTNGDVCPDLLYNNPLLDKTVTRALSKNFVNILNVSRDNSNF----NKNLRHS-LLTY 232
VIK N + +LL + +L T+AL +NF + + NSNF KNL S
Sbjct: 179 VIKKNNIILNNLL-RHVVLGGLRTQALKQNFQFSTKILQKNSNFLWKIQKNLIFSDFRLK 237
Query: 233 IRNVCQVHQ 259
++N C+V++
Sbjct: 238 LKNFCRVNR 246
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 98 DLLYNNPLLDKTVTRALSKNFVNILNVSRDNSNFNKNLRHSLLTYIRNVCQVHQRNILRP 277
D L ++ LLDK V+ +KN + +N N +F + +L + C V Q +L P
Sbjct: 26 DRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSP 85
Query: 278 M 280
+
Sbjct: 86 L 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,293,304
Number of Sequences: 27780
Number of extensions: 289346
Number of successful extensions: 881
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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