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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00958
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.48 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.48 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.48 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   4.5  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 431 SEGNGTNISALNRAKYSRSQLPPWDSVPE 517
           SEG+     AL RA YSR   P +D   E
Sbjct: 392 SEGDLEKCKALTRAAYSRDVRPKYDCTLE 420


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 431 SEGNGTNISALNRAKYSRSQLPPWDSVPE 517
           SEG+     AL RA YSR   P +D   E
Sbjct: 392 SEGDLEKCKALTRAAYSRDVRPKYDCTLE 420


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 431 SEGNGTNISALNRAKYSRSQLPPWDSVPE 517
           SEG+     AL RA YSR   P +D   E
Sbjct: 392 SEGDLEKCKALTRAAYSRDVRPKYDCTLE 420


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 583  HHIEHPLQLGASTPPPLV 636
            HH + P  L ASTP P+V
Sbjct: 1100 HHRDLPCVLRASTPAPVV 1117


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = +1

Query: 448  EYIGFKQSEVLQIAVTTMGQCSGS--GALT----STPRKAQRCISKGVASEHHIEHPLQL 609
            E  GF+   VL+  +T+ G  SGS  G+ T    S  ++ +R +  G     H E    L
Sbjct: 1052 EVEGFETKLVLEDGITSSGSDSGSSNGSWTAGTVSQQKQKRRMVKYGKLVMIH-EENAPL 1110

Query: 610  GASTPPPLV 636
              + PP +V
Sbjct: 1111 PPALPPQVV 1119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,500
Number of Sequences: 438
Number of extensions: 3780
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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