Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00956
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q99393 Cluster: ADIPOR-like receptor IZH4; n=2; Sacchar...    36   0.77 
UniRef50_Q22R70 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_Q33559 Cluster: MURF1 protein; n=7; Eukaryota|Rep: MURF...    33   9.5  

>UniRef50_Q99393 Cluster: ADIPOR-like receptor IZH4; n=2;
           Saccharomyces cerevisiae|Rep: ADIPOR-like receptor IZH4
           - Saccharomyces cerevisiae (Baker's yeast)
          Length = 312

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 22/69 (31%), Positives = 38/69 (55%)
 Frame = +2

Query: 449 PTNT*VLCDYVSEXCYNIIYTFIILFLVVTQQY*FLKRLSLQNGNEHYKKFKYIF*SHFQ 628
           PT T  + DY+    +N     + +F +V   Y F+K +SLQ   EH++KF Y+  S+  
Sbjct: 94  PTTT-TMTDYI---VFNFYLLNVFVFCMVHFIYHFVKNISLQQHLEHWQKFSYL--SNIN 147

Query: 629 IILISVLLI 655
           +++ S + I
Sbjct: 148 LLISSQITI 156


>UniRef50_Q22R70 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 663

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 130 NCSLSLKAQKKIMLFFTYTVIN**KRYKNVAALVE*AYNCSTYYSDVNISVLEIIKV 300
           NC+LS      I  F  + +I    +Y +++   E  Y+  TYY DV++ +   IK+
Sbjct: 181 NCALSTDIDNLISQFSYFDIILFANQYNHISNQFETIYDQETYYLDVSLGIFSKIKI 237


>UniRef50_Q33559 Cluster: MURF1 protein; n=7; Eukaryota|Rep: MURF1
           protein - Leishmania tarentolae (Sauroleishmania
           tarentolae)
          Length = 443

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 15/60 (25%), Positives = 33/60 (55%)
 Frame = +2

Query: 494 YNIIYTFIILFLVVTQQY*FLKRLSLQNGNEHYKKFKYIF*SHFQIILISVLLIRNKLCV 673
           +++IY+  ++ L++   +  +  +     NE+Y    +IF S F  +LIS+++    LC+
Sbjct: 289 FHLIYSLSLIILIILYYFFIVYNMFDIKYNENYFLINFIFFSFFNNLLISIMIACIFLCI 348


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,978,643
Number of Sequences: 1657284
Number of extensions: 11155996
Number of successful extensions: 20825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20814
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)