Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00955
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.012
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 0.012
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
 Frame = +3

Query: 321 CMFVLC*L*LKXLLTCKH-SLHLVYL----Y*RKF*LIITLDLLP*YSVKVIIMLVPNKI 485
           C F+   + L  LL   + +LHL++L    Y     +I T+ LL  Y V +I++ +    
Sbjct: 184 CAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLF-YCVLIILLCIYYFY 242

Query: 486 YCFNLFVIHSLEIFFKYFY 542
           Y F LF +H L +   Y++
Sbjct: 243 YAFILFTVHLLLLVCIYYF 261



 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 444 YSVKVIIMLVPNKIYCFNLFVIHSLEIFFKYFY 542
           Y   +I++ V    Y F +F +H L +   Y++
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 307 PGACGVCLYCVSYN 348
           P  C +  YC++YN
Sbjct: 431 PDDCSIFYYCLAYN 444


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 410 LVNYYPRLI 436
           LVN+YPRLI
Sbjct: 89  LVNWYPRLI 97


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 289 LPLHLVPGACGVCL 330
           LP HLV G C V L
Sbjct: 341 LPAHLVAGTCFVQL 354


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 90  WIAFADSHARL 122
           W  FADSH+ L
Sbjct: 220 WAGFADSHSPL 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,546
Number of Sequences: 336
Number of extensions: 2371
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)