Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00954
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 154 5e-38
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 154 5e-38
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 151 3e-37
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 151 3e-37
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 35 0.045
U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna syn... 35 0.045
U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna syn... 35 0.045
Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical pr... 31 0.96
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 2.9
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 29 2.9
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 29 2.9
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 29 2.9
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 29 2.9
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 29 2.9
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 2.9
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 29 2.9
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 29 2.9
AF016676-1|AAG24103.1| 598|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 154 bits (374), Expect = 5e-38
Identities = 80/136 (58%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Frame = +3
Query: 258 IDTPVFELKDVLTGKYGEDS-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRY 434
IDTPVFEL+DVL GKYGE+ KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY
Sbjct: 98 IDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRY 157
Query: 435 HIAKVYRRDNPAMTRGRYREFYQCDLT*LVYMILWYLMQNA*R**QRS*KLLT*GNISSK 614
IAKVYRRD P M+RGRYREFYQCD L L G
Sbjct: 158 QIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFIN 217
Query: 615 WNHRRLLDGMFEACGV 662
NHR +L+GMF G+
Sbjct: 218 LNHRLILEGMFAVSGI 233
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +1
Query: 1 LLLKIQEQGDLVR-KLKAAKDSNERVKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKG 168
L +++ + V+ ++ A+ S R+KE+V+ L+ K + E P+K F LKT KG
Sbjct: 9 LAFSVRQAEETVKPRIAYAQRSGRRIKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKG 67
Query: 169 TRDYNPQQMTIRNNVLDKIITVFRRHGADVL 261
TRDY P Q +RN+VL + F R+GA+ +
Sbjct: 68 TRDYGPAQSALRNSVLQTVTETFNRYGAETI 98
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +2
Query: 509 FDIAGVYDPMVPDAECLKVVTEILEALDIGQYILKVEPQKI 631
FDIAG YD M+P+AECL +V E+L L+IG++ + + + I
Sbjct: 183 FDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFINLNHRLI 223
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 154 bits (374), Expect = 5e-38
Identities = 80/136 (58%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Frame = +3
Query: 258 IDTPVFELKDVLTGKYGEDS-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRY 434
IDTPVFEL+DVL GKYGE+ KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY
Sbjct: 97 IDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRY 156
Query: 435 HIAKVYRRDNPAMTRGRYREFYQCDLT*LVYMILWYLMQNA*R**QRS*KLLT*GNISSK 614
IAKVYRRD P M+RGRYREFYQCD L L G
Sbjct: 157 QIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFIN 216
Query: 615 WNHRRLLDGMFEACGV 662
NHR +L+GMF G+
Sbjct: 217 LNHRLILEGMFAVSGI 232
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +1
Query: 1 LLLKIQEQGDLVRKLKAAKDSNERVKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKGT 171
L+ + Q GD +R+LK K +KE+V+ L+ K + E P+K F LKT KGT
Sbjct: 9 LMQEAQALGDEIRQLKLDKADQAIIKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKGT 67
Query: 172 RDYNPQQMTIRNNVLDKIITVFRRHGADVL 261
RDY P Q +RN+VL + F R+GA+ +
Sbjct: 68 RDYGPAQSALRNSVLQTVTETFNRYGAETI 97
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +2
Query: 509 FDIAGVYDPMVPDAECLKVVTEILEALDIGQYILKVEPQKI 631
FDIAG YD M+P+AECL +V E+L L+IG++ + + + I
Sbjct: 182 FDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFINLNHRLI 222
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 151 bits (367), Expect = 3e-37
Identities = 69/85 (81%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 IDTPVFELKDVLTGKYGEDS-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRY 434
IDTPVFEL+DVL GKYGE+ KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY
Sbjct: 47 IDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRY 106
Query: 435 HIAKVYRRDNPAMTRGRYREFYQCD 509
IAKVYRRD P M+RGRYREFYQCD
Sbjct: 107 QIAKVYRRDQPVMSRGRYREFYQCD 131
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 136 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGADVL 261
P KF LKT KGTRDY P Q +RN+VL + F R+GA+ +
Sbjct: 6 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETI 47
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 151 bits (367), Expect = 3e-37
Identities = 69/85 (81%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 IDTPVFELKDVLTGKYGEDS-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRY 434
IDTPVFEL+DVL GKYGE+ KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY
Sbjct: 58 IDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRY 117
Query: 435 HIAKVYRRDNPAMTRGRYREFYQCD 509
IAKVYRRD P M+RGRYREFYQCD
Sbjct: 118 QIAKVYRRDQPVMSRGRYREFYQCD 142
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 136 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGADVL 261
P KF LKT KGTRDY P Q +RN+VL + F R+GA+ +
Sbjct: 17 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETI 58
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 10 KIQEQGDLVRKLKAAKDSNERVKEEVSKLLALKAQ 114
+I+ QG LVR+LK ++ K+ ++KLLALK Q
Sbjct: 881 QIESQGALVRELKGKDAKSQATKDAIAKLLALKKQ 915
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 1 LLLKIQEQGDLVRKLKAAKDSNERVKEEVSKLLALKA 111
LL +I+EQG +VR K+ ++ + ++KLLALKA
Sbjct: 1089 LLKEIEEQGAVVRDAKSKDPKSQDSADAINKLLALKA 1125
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 13 IQEQGDLVRKLKAAKDSNERVKEEVSKLLALKAQ 114
I+ QG LVR+LK ++ K+ ++KLL LK Q
Sbjct: 808 IEAQGLLVRELKGKDAKSQATKDAIAKLLELKKQ 841
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 13 IQEQGDLVRKLKAAKDSNERVKEEVSKLLALK 108
I++QG +VR LK ++ K+ ++KLL LK
Sbjct: 737 IEQQGGIVRDLKTKDAKSQATKDAIAKLLDLK 768
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 10 KIQEQGDLVRKLKAAKDSNERVKEEVSKLLALK 108
+I+ QG LVR LK ++ K+ ++KLL LK
Sbjct: 948 QIEAQGVLVRDLKNKDSKSQETKDAIAKLLELK 980
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 10 KIQEQGDLVRKLKAAKDSNERVKEEVSKLLALKAQ 114
+I +Q LVR+LK ++ K+ ++KLL LK Q
Sbjct: 1020 QIDDQALLVRELKMKDAKSQETKDAIAKLLQLKKQ 1054
>U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform b protein.
Length = 454
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 10 KIQEQGDLVRKLKAAKDSNERVKEE-VSKLLALK 108
+I+EQG VR++K K+S E K+E + KLLALK
Sbjct: 10 EIEEQGAEVRRVKGDKNSTEEAKKEAIDKLLALK 43
>U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform a protein.
Length = 581
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 10 KIQEQGDLVRKLKAAKDSNERVKEE-VSKLLALK 108
+I+EQG VR++K K+S E K+E + KLLALK
Sbjct: 10 EIEEQGAEVRRVKGDKNSTEEAKKEAIDKLLALK 43
>Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical
protein C11E4.8 protein.
Length = 209
Score = 30.7 bits (66), Expect = 0.96
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 207 ITYCHLLWVVVSCSLWCFKS 148
I YC ++W+V CS W +S
Sbjct: 42 IAYCEIMWIVSQCSFWTAES 61
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 483 FL*SWQDCLFCTP*LYDISLK*LFYSLLNTEPKVQSNHILMKEFPHL 343
F+ + CLF TP L ++ K +F S +NT+ ++ S ++ F L
Sbjct: 34 FMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLGSKGVISAGFASL 80
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 19 EQGDLVRKLKAAKDSNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMT 198
E G V KL + NE V EE+ K + A + ED G + + + +
Sbjct: 415 ENGLNVFKLDPEFEKNEEVYEEIRKEIIGNADISDEDGGDELDDEEEGSDVEEAPKKTTE 474
Query: 199 IRNNVLDKIITVFRR 243
I +N D+ +T FRR
Sbjct: 475 IIDNT-DQNLTAFRR 488
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -2
Query: 399 NTEPKVQSNHILMKEFPHLGL-SNHRLILNPHHTSQ*AHPLA---QKQVYQYISSVSPKN 232
N P+V+ +K+ P + NH IL P + LA K ++ + V+P+
Sbjct: 259 NLIPEVEGYRRKIKKNPEAAIPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPEL 318
Query: 231 CNNFIQYIITYCHLLWVVVSCSLWCFKSKLLWACI 127
I +I +W+ VS +L F S LL + I
Sbjct: 319 LRQLISFIEDKNQPMWIGVSIALLMFLSSLLQSMI 353
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -2
Query: 399 NTEPKVQSNHILMKEFPHLGL-SNHRLILNPHHTSQ*AHPLA---QKQVYQYISSVSPKN 232
N P+V+ +K+ P + NH IL P + LA K ++ + V+P+
Sbjct: 259 NLIPEVEGYRRKIKKNPEAAIPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPEL 318
Query: 231 CNNFIQYIITYCHLLWVVVSCSLWCFKSKLLWACI 127
I +I +W+ VS +L F S LL + I
Sbjct: 319 LRQLISFIEDKNQPMWIGVSIALLMFLSSLLQSMI 353
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -2
Query: 399 NTEPKVQSNHILMKEFPHLGL-SNHRLILNPHHTSQ*AHPLA---QKQVYQYISSVSPKN 232
N P+V+ +K+ P + NH IL P + LA K ++ + V+P+
Sbjct: 259 NLIPEVEGYRRKIKKNPEAAIPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPEL 318
Query: 231 CNNFIQYIITYCHLLWVVVSCSLWCFKSKLLWACI 127
I +I +W+ VS +L F S LL + I
Sbjct: 319 LRQLISFIEDKNQPMWIGVSIALLMFLSSLLQSMI 353
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -2
Query: 399 NTEPKVQSNHILMKEFPHLGL-SNHRLILNPHHTSQ*AHPLA---QKQVYQYISSVSPKN 232
N P+V+ +K+ P + NH IL P + LA K ++ + V+P+
Sbjct: 259 NLIPEVEGYRRKIKKNPEAAIPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPEL 318
Query: 231 CNNFIQYIITYCHLLWVVVSCSLWCFKSKLLWACI 127
I +I +W+ VS +L F S LL + I
Sbjct: 319 LRQLISFIEDKNQPMWIGVSIALLMFLSSLLQSMI 353
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -2
Query: 399 NTEPKVQSNHILMKEFPHLGL-SNHRLILNPHHTSQ*AHPLA---QKQVYQYISSVSPKN 232
N P+V+ +K+ P + NH IL P + LA K ++ + V+P+
Sbjct: 259 NLIPEVEGYRRKIKKNPEAAIPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPEL 318
Query: 231 CNNFIQYIITYCHLLWVVVSCSLWCFKSKLLWACI 127
I +I +W+ VS +L F S LL + I
Sbjct: 319 LRQLISFIEDKNQPMWIGVSIALLMFLSSLLQSMI 353
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 19 EQGDLVRKLKAAKDSNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMT 198
E G V KL + NE V EE+ K + A + ED G + + + +
Sbjct: 415 ENGLNVFKLDPEFEKNEEVYEEIRKEIIGNADISDEDGGDELDDEEEGSDVEEAPKKTTE 474
Query: 199 IRNNVLDKIITVFRR 243
I +N D+ +T FRR
Sbjct: 475 IIDNT-DQNLTAFRR 488
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 330 DLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYREFYQC 506
++ D+ G ++L DL R+ N + +KR++ +VY + + G E ++C
Sbjct: 1105 EVLDRSGVPVALPMDLRQNFVRFCVRNSVQRMKRFNFGRVYSQTS---ANGHPHERWEC 1160
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -2
Query: 399 NTEPKVQSNHILMKEFPHLGL-SNHRLILNPHHTSQ*AHPLA---QKQVYQYISSVSPKN 232
N P+V+ +K+ P + NH IL P + LA K ++ + V+P+
Sbjct: 259 NLIPEVEGYRRKIKKNPEAAIPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPEL 318
Query: 231 CNNFIQYIITYCHLLWVVVSCSLWCFKSKLLWACI 127
I +I +W+ VS +L F S LL + I
Sbjct: 319 LRQLISFIEDKNQPMWIGVSIALLMFLSSLLQSMI 353
>AF016676-1|AAG24103.1| 598|Caenorhabditis elegans Hypothetical
protein F41B5.6 protein.
Length = 598
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 414 FYSLLNTEPK--VQSNHILMKEFPHLGLSNHRLILNPHHTSQ 295
+Y L E K V NH+ ++E H +NH + HH Q
Sbjct: 321 YYESLQPEFKNPVTGNHVQLEETHHSSKANHHPLSVQHHLQQ 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,010,110
Number of Sequences: 27780
Number of extensions: 311879
Number of successful extensions: 893
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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