Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00953
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094812-1|AAM11165.1|  125|Drosophila melanogaster LD30488p pro...    80   2e-15
AE014296-3173|AAF49143.1|  125|Drosophila melanogaster CG9231-PA...    80   2e-15
AY071407-1|AAL49029.1|  427|Drosophila melanogaster RE49394p pro...    29   4.9  
AE014134-2549|AAF53430.2|  427|Drosophila melanogaster CG3688-PA...    29   4.9  
AY061198-1|AAL28746.1|  114|Drosophila melanogaster LD15505p pro...    29   6.5  

>AY094812-1|AAM11165.1|  125|Drosophila melanogaster LD30488p
           protein.
          Length = 125

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 33/78 (42%), Positives = 57/78 (73%)
 Frame = +1

Query: 238 KIQEQIEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILSGKAAAKRGESVHQM 417
           K + Q E+P FVS +++ER +++ RI+++N+++ LTA+     + SGK AAK+GESV +M
Sbjct: 44  KYKSQSEIPNFVSQDVMERCRNKMRIRLANIMIALTAVGCAIMVYSGKQAAKKGESVTKM 103

Query: 418 NLDWHKKYQEEHKEKSSA 471
           NL+WHK++ +  + + SA
Sbjct: 104 NLEWHKQFNDSQQSEGSA 121


>AE014296-3173|AAF49143.1|  125|Drosophila melanogaster CG9231-PA
           protein.
          Length = 125

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 33/78 (42%), Positives = 57/78 (73%)
 Frame = +1

Query: 238 KIQEQIEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILSGKAAAKRGESVHQM 417
           K + Q E+P FVS +++ER +++ RI+++N+++ LTA+     + SGK AAK+GESV +M
Sbjct: 44  KYKSQSEIPNFVSQDVMERCRNKMRIRLANIMIALTAVGCAIMVYSGKQAAKKGESVTKM 103

Query: 418 NLDWHKKYQEEHKEKSSA 471
           NL+WHK++ +  + + SA
Sbjct: 104 NLEWHKQFNDSQQSEGSA 121


>AY071407-1|AAL49029.1|  427|Drosophila melanogaster RE49394p
           protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -3

Query: 417 HLMNRFPSLSSSFPRQYCSKTCQSSKKHKHI*NFDSSFTLRSFNNFS*YKWRDFNLFL 244
           HL+ R   L S  P++     C++ ++  H+ NF  +   RS    S  +W    L+L
Sbjct: 352 HLLQRMSGLESVQPQR-----CENDEEFAHVSNFQGAQRSRSVGTLSKSEWEAATLYL 404


>AE014134-2549|AAF53430.2|  427|Drosophila melanogaster CG3688-PA
           protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -3

Query: 417 HLMNRFPSLSSSFPRQYCSKTCQSSKKHKHI*NFDSSFTLRSFNNFS*YKWRDFNLFL 244
           HL+ R   L S  P++     C++ ++  H+ NF  +   RS    S  +W    L+L
Sbjct: 352 HLLQRMSGLESVQPQR-----CENDEEFAHVSNFQGAQRSRSVGTLSKSEWEAATLYL 404


>AY061198-1|AAL28746.1|  114|Drosophila melanogaster LD15505p
           protein.
          Length = 114

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +1

Query: 253 IEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILSGKAAAKRGE 402
           +EVP  ++ +I+ +     + +I N+L+L TA  S    L+ +  A RGE
Sbjct: 57  LEVPAMIAHDILGQGLGTNQAQIENILVLRTATQSTLLGLALRFVAVRGE 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,796,427
Number of Sequences: 53049
Number of extensions: 399695
Number of successful extensions: 1523
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)