Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00952
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.16 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   1.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 310 RAPRPSVYNSSLAGTSSSSRIRSQKVLARRLH 215
           RAPRP +YN ++   +   R + QKVL + LH
Sbjct: 213 RAPRPWIYNETIYSLTPQGR-KEQKVL-KSLH 242


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 277 LAGTSSSSRIRSQKVLARRLHRRSQRT 197
           LAGTSS S   ++ ++ RR H R   T
Sbjct: 259 LAGTSSPSNRFTRHLIQRRTHTRHTTT 285


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 698 GHWLYECST*IIKCV 654
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 698 GHWLYECST*IIKCV 654
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 698 GHWLYECST*IIKCV 654
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 698 GHWLYECST*IIKCV 654
           GHWL + +  +I CV
Sbjct: 784 GHWLQKATEHVIGCV 798


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,329
Number of Sequences: 336
Number of extensions: 2792
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)