Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00952
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            28   0.27 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.5  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 25  KLGEHFENDDDVIIAKIDATANELEHTKITSFPTI--KLYSKDNQV 156
           +LG +FE +  + ++ IDA++N+L     ++ P     LY  DN +
Sbjct: 583 ELGNYFEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLI 628


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 334  TILWKSHKRAPRPSVYNSSLAGTSSSSRIRSQKVLARRLHRRSQR 200
            T+  +  +   RPS+ +SS   +   + IR++    R+ HR+ Q+
Sbjct: 1062 TVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQ 1106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,277
Number of Sequences: 2352
Number of extensions: 12554
Number of successful extensions: 106
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)