Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00952
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           24   1.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   7.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   7.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.4  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 325 WKSHKRAPRPSVYNSSL 275
           W S K  PR S+Y+S L
Sbjct: 370 WSSQKSEPRRSIYSSLL 386


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 310 RAPRPSVYNSSLAGTSSSSRIRSQKVLARRLHRR 209
           + P    YN+ L G++  SR    +   +RLH R
Sbjct: 79  KLPTTPEYNNHLYGSTPDSRDYFSRPFEKRLHSR 112


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 133 LYSKDNQVHDYNGERTLAGLTKFVE 207
           LY  D  +HD++ +  LAG  + VE
Sbjct: 338 LYINDLSMHDFSRDLMLAGTQQSVE 362


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 31  GEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGE 174
           G++F NDDD+    I   AN  ++ K      + L  +  +V D NG+
Sbjct: 293 GKNFNNDDDIKSYLIQFFAN--KNQKFYERGIMMLPERWQKVIDQNGQ 338


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 199  FVETDGEGAEPVPSVTEFERRKMCLPET 282
            ++  +GE  +PV   T F+ + M  P+T
Sbjct: 1122 YMNLEGEQKDPVIFSTSFDSKVMTRPDT 1149


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 531 FNKNLRSKSTAVKYFECESYFMTRCDESLRNDGIFYGLLVTYAL 662
           FN+N  + + +   F  E    +  +   RN  +F+GLL   A+
Sbjct: 287 FNENSEAAARSFVPFSIERSSQSVAEVMDRNGVLFFGLLSDLAI 330


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 348 NYLLFILTNICILFARLFVEL 410
           NY +F+  N  + F R  +EL
Sbjct: 20  NYFIFLYFNSLVRFRRFTIEL 40


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 729 NQFHVYSLSLWSLVVRMFDI 670
           N+ H  S   WSL V MF++
Sbjct: 539 NKGHDISADYWSLGVLMFEL 558


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,124
Number of Sequences: 438
Number of extensions: 3425
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)