Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00952
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 59 4e-09
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 57 1e-08
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 57 1e-08
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 52 4e-07
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 51 7e-07
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 49 3e-06
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 48 9e-06
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 46 4e-05
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 46 4e-05
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 46 4e-05
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 45 5e-05
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 41 0.001
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 36 0.022
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 32 0.36
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 32 0.48
At5g55920.1 68418.m06975 nucleolar protein, putative similar to ... 31 0.63
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 31 0.84
At3g42410.1 68416.m04385 replication protein-related weak simila... 31 1.1
At5g18740.1 68418.m02224 expressed protein predicted proteins - ... 30 1.5
At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam ... 29 2.6
At1g10770.1 68414.m01233 invertase/pectin methylesterase inhibit... 28 5.9
At4g15450.1 68417.m02362 senescence/dehydration-associated prote... 28 7.8
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGE 174
++L PI D++ F+ND VIIAK+DATAN++ + + FPTI S V Y G+
Sbjct: 406 QKLAPILDEVALSFQNDPSVIIAKLDATANDIPSDTFDVKGFPTIYFRSASGNVVVYEGD 465
Query: 175 RTLAGLTKFVETDGE 219
RT FVE + E
Sbjct: 466 RTKEDFINFVEKNSE 480
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQV-HDYNG 171
K L P Y+K+ F+ ++ V+IA +DA A++ E ++ FPT+K + KDN+ HDY+G
Sbjct: 175 KSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDG 234
Query: 172 ERTLAGLTKFV 204
R L F+
Sbjct: 235 GRDLDDFVSFI 245
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK--ITSFPTIKLYSKDN-QVHDYNG 171
K+L P Y+KLG F+ V+IAK+D + TK ++ +PTI+ + K + + Y G
Sbjct: 56 KKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEG 115
Query: 172 ERTLAGLTKFVETDG 216
R L ++V +G
Sbjct: 116 PRNAEALAEYVNKEG 130
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQV-HDYNG 171
K L P Y+K+ F+ ++ V+IA +DA A++ E ++ FPT+K + KDN+ HDY+G
Sbjct: 175 KSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDG 234
Query: 172 ERTLAGLTKFV 204
R L F+
Sbjct: 235 GRDLDDFVSFI 245
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK--ITSFPTIKLYSKDN-QVHDYNG 171
K+L P Y+KLG F+ V+IAK+D + TK ++ +PTI+ + K + + Y G
Sbjct: 56 KKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEG 115
Query: 172 ERTLAGLTKFVETDG 216
R L ++V +G
Sbjct: 116 PRNAEALAEYVNKEG 130
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGE 174
++L PI D++ +++D V+IAK+DATAN+ + + FPTI S V Y G+
Sbjct: 408 QKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEGD 467
Query: 175 RTLAGLTKFVE 207
RT FV+
Sbjct: 468 RTKEDFISFVD 478
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +1
Query: 13 PIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHD---YNGERTL 183
PIY+KLG++ + D +++AK+D T+NE K FPTI + N+ D + +RT+
Sbjct: 475 PIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFPTILFFPGGNKSFDPIAVDVDRTV 534
Query: 184 AGLTKFVE 207
L KF++
Sbjct: 535 VELYKFLK 542
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 64 IAKIDAT--ANELEHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE 207
+AKIDAT + + +I FPT+ L+ Y GERT G+ +++
Sbjct: 151 LAKIDATEEGDLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLK 200
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGE 174
++L PI D++ +++D V+IAK+DATAN+ + + FPTI S V Y G+
Sbjct: 408 QKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEGD 467
Query: 175 RTLAGLTKFV 204
R L F+
Sbjct: 468 RQRESLYLFI 477
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 7 LVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHD---YNGER 177
L P+Y+KL +H + D ++I K+D T NE K FPTI + N+ + + +R
Sbjct: 477 LEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKTSEPITVDTDR 536
Query: 178 TLAGLTKFV 204
T+ KF+
Sbjct: 537 TVVAFYKFL 545
Score = 36.7 bits (81), Expect = 0.017
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDAT-ANEL-EHTKITSFPTIKLYSKDNQVHDYNGE 174
+ L P Y + +D V++AKIDAT NEL + ++ FPT+ L+ D + Y G
Sbjct: 136 QSLAPEYAAAATELK-EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGG 193
Query: 175 RTLAGLTKFVETD-GEGAEPVPSVTEFER 258
RT + +V+ G G + ++ + E+
Sbjct: 194 RTKETIVTWVKKKIGPGVYNLTTLDDAEK 222
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKIT--SFPTIKLYSKDNQVHDYNGE 174
K+L +++ LG+ E DD++ + ++D + TK+ S+PT L+ +V Y G+
Sbjct: 59 KKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGK 118
Query: 175 RTLAGLTKFVETDGEGA 225
R + L FV + E A
Sbjct: 119 RDVESLKAFVVEETEKA 135
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKIT--SFPTIKLYSKDNQVHDYNGE 174
K+L +++ LG+ E DD++ + ++D + TK+ S+PT L+ +V Y G+
Sbjct: 59 KKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGK 118
Query: 175 RTLAGLTKFVETDGEGA 225
R + L FV + E A
Sbjct: 119 RDVESLKAFVVEETEKA 135
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKIT--SFPTIKLYSKDNQVHDYNGE 174
K+L +++ LG+ E DD++ + ++D + TK+ S+PT L+ +V Y G+
Sbjct: 59 KKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGK 118
Query: 175 RTLAGLTKFVETDGEGA 225
R + L FV + E A
Sbjct: 119 RDVESLKAFVVEETEKA 135
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 7 LVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHD 162
L P+Y+KL +H + D ++I K+D T NE K FPTI + N+ +
Sbjct: 477 LEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKTSE 528
Score = 36.7 bits (81), Expect = 0.017
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDAT-ANEL-EHTKITSFPTIKLYSKDNQVHDYNGE 174
+ L P Y + +D V++AKIDAT NEL + ++ FPT+ L+ D + Y G
Sbjct: 136 QSLAPEYAAAATELK-EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGG 193
Query: 175 RTLAGLTKFVETD-GEGAEPVPSVTEFER 258
RT + +V+ G G + ++ + E+
Sbjct: 194 RTKETIVTWVKKKIGPGVYNLTTLDDAEK 222
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +1
Query: 22 DKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLY 138
+KL +HF+ ++++ A+IDA+ANE + +PTI LY
Sbjct: 457 EKLSQHFKGFENLVFARIDASANEHPKLTVDDYPTILLY 495
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +1
Query: 22 DKLGEHFENDDDVIIAKIDATANELEHTKI---TSFPTIKLY 138
+KL +HF+ ++++ A+IDA+AN EHTK+ +P I LY
Sbjct: 458 EKLAKHFKGFENLVFARIDASAN--EHTKLQVDDKYPIILLY 497
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERT 180
K L P ++K+ + V DA + + I FPTIK++ DY G R
Sbjct: 64 KALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARD 123
Query: 181 LAGLTKF 201
+ F
Sbjct: 124 AKSIANF 130
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 70 KIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERTLA-GLTKFVE 207
KI +ELE TK + +KLY K V DYN ++ ++ G K+VE
Sbjct: 538 KIGFLTDELEKTKADN---VKLYGKIRYVQDYNHDKVVSRGSKKYVE 581
>At5g55920.1 68418.m06975 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}, SP|P40991 Nucleolar protein NOP2
{Saccharomyces cerevisiae}; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 682
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 43 ENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEG 222
++DDD I+AK DA +L K + ++ + K + VHD E L E + E
Sbjct: 146 DSDDDDIVAKSDAIDRDLAMQKKDAAAELEDFIKQDDVHDEEPEHDAFRLPTEEELEEEA 205
Query: 223 AEP 231
P
Sbjct: 206 RGP 208
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +1
Query: 1 KQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERT 180
+ L P ++K+ + V DA + + + FPTIK++ DY G R
Sbjct: 62 QSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARD 121
Query: 181 LAGLTKF 201
+++F
Sbjct: 122 AKSISQF 128
>At3g42410.1 68416.m04385 replication protein-related weak
similarity to Replication Protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) (DMRPA1)
(GI:2498844)(SP:Q24492) [Drosophila melanogaster]
Length = 474
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 7 LVPIYDK---LGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGE 174
L P YD +G + DD+V+ KID T +++ K F +KL N +Y+GE
Sbjct: 239 LFPDYDLQTYIGWNAYGDDEVVDGKIDYTFSDVHPRKTRWFVFVKLLRLWNWPPNYDGE 297
>At5g18740.1 68418.m02224 expressed protein predicted proteins -
Arabidopsis thaliana; expression supported by MPSS
Length = 609
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 145 DNQVHDYNGERTLAGLTKFVETDGEGAEPVPSVTEFER 258
D+ D NG R T++ + EG+EP+ ++ + ER
Sbjct: 534 DDDDDDENGNRLFRACTEYTYNEAEGSEPIFTIPKSER 571
>At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1720
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 7 LVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKD---NQVHDYNGER 177
LV I GEH E D D++ ++++ +KI SF + + +K +VH +N R
Sbjct: 1299 LVVISSCNGEHMEPDTDIVSG---LGLHDIDKSKIASFSIVSIANKSQKGQEVHFFNDSR 1355
Query: 178 TLAG 189
G
Sbjct: 1356 LRDG 1359
>At1g10770.1 68414.m01233 invertase/pectin methylesterase inhibitor
family protein contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 167
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 657 ALDNLCRTFVQPVTRERESTHETDYPLHLWTRIS 758
A +LCR V+ VT R++TH T L T+++
Sbjct: 42 AYPSLCRPLVKRVTSPRKATHRTIQALEAKTKLA 75
>At4g15450.1 68417.m02362 senescence/dehydration-associated
protein-related similar to senescence-associated protein
12 [Hemerocallis hybrid cultivar]
gi|3551958|gb|AAC34857; similar to early-responsive to
dehydration stress ERD7 protein [Arabidopsis thaliana]
gi|15320412|dbj|BAB63916
Length = 331
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +1
Query: 49 DDDVIIAKIDATANELEHTKITSFPTIKLYSKDN--QVHDYNGERTLAGLTKFV--ETDG 216
D +V +A + N+L+ I P +KL S+D + +GE G+T F E D
Sbjct: 69 DSNVALAMVVRIGNDLQWPVIKDEPVVKLDSRDYLFTLPVKDGEPLSYGITFFPIDENDI 128
Query: 217 EGAEPVPSVTEFERRKMCLPETSYKHLAAAPSYETSI 327
+ + +F R C + +++ S +S+
Sbjct: 129 VFVNSIELLDDFLRENSCFSSSPSSSSSSSSSSSSSV 165
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,054,881
Number of Sequences: 28952
Number of extensions: 241384
Number of successful extensions: 680
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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