Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00951
         (737 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58081| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_30126| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  

>SB_58081| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 190

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 388 CITMSTSQLKINMNLSFCNKKATLPGLSKKKFFFSILQLSIC 513
           C+  +   +K   N+ FC ++A +  ++KK+F F   +LS C
Sbjct: 7   CLRYTPILMKTVKNVDFCAEEAAVKDVTKKRFDFCPHKLSEC 48


>SB_30126| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 153

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 157 LALLVFFHAFSLPIRW*VRSRADLRNFASSKLGKSSVR 44
           LAL + F  FSL +R+ +R R  LR   +  LGK   R
Sbjct: 50  LALTLVFDRFSLELRFRLRFRLRLRPSENQPLGKQVAR 87


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,145,499
Number of Sequences: 59808
Number of extensions: 382512
Number of successful extensions: 757
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)