Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00950
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D9989C Cluster: PREDICTED: similar to 3-oxoacid ... 48 2e-04
UniRef50_P55809 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A tran... 46 7e-04
UniRef50_O34263 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A tran... 46 9e-04
UniRef50_P63651 Cluster: Probable succinyl-CoA:3-ketoacid-coenzy... 43 0.008
UniRef50_A1HKZ7 Cluster: Butyrate--acetoacetate CoA-transferase;... 42 0.019
UniRef50_A0L0X2 Cluster: 3-oxoacid CoA-transferase, B subunit; n... 41 0.025
UniRef50_A5G9N0 Cluster: 3-oxoacid CoA-transferase, B subunit; n... 40 0.057
UniRef50_A6R6Q3 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A tran... 39 0.10
UniRef50_P44874 Cluster: Acetate CoA-transferase subunit beta; n... 38 0.18
UniRef50_P76459 Cluster: Acetate CoA-transferase subunit beta; n... 37 0.40
UniRef50_A0JUR3 Cluster: 3-oxoacid CoA-transferase, B subunit; n... 37 0.53
UniRef50_Q8RGL8 Cluster: Butyrate-acetoacetate CoA-transferase s... 35 1.6
UniRef50_Q3JT23 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A0LKM1 Cluster: 3-oxoacid CoA-transferase, B subunit; n... 33 6.6
UniRef50_A6LNI1 Cluster: Beta-glucosidase; n=3; Thermotogaceae|R... 33 8.7
UniRef50_A5ZMW4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
>UniRef50_UPI0000D9989C Cluster: PREDICTED: similar to 3-oxoacid CoA
transferase 2; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 3-oxoacid CoA transferase 2 - Macaca mulatta
Length = 691
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY--RKMR 623
GK VKGMGGAMDLVS+P+T+ V + + K + K C D K
Sbjct: 324 GKKVKGMGGAMDLVSSPKTRVVVTMEHCTKDNIPKIMEKCTMPLTGKQC-VDRIITEKAV 382
Query: 624 LRSRQRKGLILTELAEGVKVED 689
+++GL LTEL EG+ V+D
Sbjct: 383 FDVHRKRGLTLTELWEGLTVDD 404
Score = 40.7 bits (91), Expect = 0.033
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 497 PKN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
PK VV TMEH K+ KI+ +CT+PLTGK
Sbjct: 340 PKTRVVVTMEHCTKDNIPKIMEKCTMPLTGK 370
>UniRef50_P55809 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A
transferase 1, mitochondrial precursor; n=294; cellular
organisms|Rep: Succinyl-CoA:3-ketoacid-coenzyme A
transferase 1, mitochondrial precursor - Homo sapiens
(Human)
Length = 520
Score = 46.4 bits (105), Expect = 7e-04
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY-RKMRL 626
GKMVKGMGGAMDLVS+ +TK V + + K + K C K
Sbjct: 417 GKMVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVF 476
Query: 627 RSRQRKGLILTELAEGVKVED 689
++KGL L EL EG+ V+D
Sbjct: 477 DVDKKKGLTLIELWEGLTVDD 497
Score = 46.0 bits (104), Expect = 9e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TMEH+AK +HKI+ +CTLPLTGK
Sbjct: 434 KTKVVVTMEHSAKGNAHKIMEKCTLPLTGK 463
>UniRef50_O34263 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A
transferase subunit B; n=54; cellular organisms|Rep:
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
- Xanthomonas campestris pv. campestris
Length = 213
Score = 46.0 bits (104), Expect = 9e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTGKTVL 598
VV MEH AK+G+HKILP+C LPLTG V+
Sbjct: 139 VVVLMEHVAKDGTHKILPQCDLPLTGVGVV 168
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVS 494
GKMVKGMGGAMDLV+
Sbjct: 120 GKMVKGMGGAMDLVA 134
>UniRef50_P63651 Cluster: Probable succinyl-CoA:3-ketoacid-coenzyme
A transferase subunit B; n=22; cellular organisms|Rep:
Probable succinyl-CoA:3-ketoacid-coenzyme A transferase
subunit B - Mycobacterium bovis
Length = 218
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTG 586
V+ MEHTAK+GS KIL CTLPLTG
Sbjct: 142 VIVMMEHTAKDGSPKILERCTLPLTG 167
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPR 503
GKMVKGMGGAMDLV R
Sbjct: 123 GKMVKGMGGAMDLVHGAR 140
>UniRef50_A1HKZ7 Cluster: Butyrate--acetoacetate CoA-transferase;
n=2; Ralstonia pickettii|Rep: Butyrate--acetoacetate
CoA-transferase - Ralstonia pickettii 12J
Length = 224
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTGK 589
V+ + HT K+G+ KILP CTLPLTG+
Sbjct: 145 VIAALAHTDKHGNSKILPRCTLPLTGR 171
>UniRef50_A0L0X2 Cluster: 3-oxoacid CoA-transferase, B subunit; n=5;
cellular organisms|Rep: 3-oxoacid CoA-transferase, B
subunit - Shewanella sp. (strain ANA-3)
Length = 220
Score = 41.1 bits (92), Expect = 0.025
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTGK 589
++ TM H +K+G K+L ECTLPLTGK
Sbjct: 139 IIVTMTHASKHGESKLLTECTLPLTGK 165
>UniRef50_A5G9N0 Cluster: 3-oxoacid CoA-transferase, B subunit; n=3;
Bacteria|Rep: 3-oxoacid CoA-transferase, B subunit -
Geobacter uraniumreducens Rf4
Length = 218
Score = 39.9 bits (89), Expect = 0.057
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTGKTVL 598
VV MEH +KNG KI+ C+LPLTGK V+
Sbjct: 139 VVVIMEHCSKNGQPKIVNSCSLPLTGKGVV 168
>UniRef50_A6R6Q3 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A
transferase 1, mitochondrial; n=1; Ajellomyces
capsulatus NAm1|Rep: Succinyl-CoA:3-ketoacid-coenzyme A
transferase 1, mitochondrial - Ajellomyces capsulatus
NAm1
Length = 491
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTGK 589
VV TMEHT K G+ KIL +C PLTG+
Sbjct: 412 VVVTMEHTDKKGNPKILKQCEFPLTGR 438
>UniRef50_P44874 Cluster: Acetate CoA-transferase subunit beta;
n=85; Bacteria|Rep: Acetate CoA-transferase subunit beta
- Haemophilus influenzae
Length = 223
Score = 38.3 bits (85), Expect = 0.18
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLT 583
K ++G MEH AK+GS KIL +CTLPLT
Sbjct: 135 KKVIIG-MEHCAKSGSSKILKKCTLPLT 161
>UniRef50_P76459 Cluster: Acetate CoA-transferase subunit beta;
n=11; Bacteria|Rep: Acetate CoA-transferase subunit beta
- Escherichia coli (strain K12)
Length = 216
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTGK 589
V+ MEH AK+GS KIL CT+PLT +
Sbjct: 135 VIIAMEHCAKDGSAKILRRCTMPLTAQ 161
>UniRef50_A0JUR3 Cluster: 3-oxoacid CoA-transferase, B subunit;
n=12; Bacteria|Rep: 3-oxoacid CoA-transferase, B subunit
- Arthrobacter sp. (strain FB24)
Length = 255
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTGK 589
V+ MEH ++G KI+ +CTLPLTGK
Sbjct: 174 VIVMMEHVDRSGRPKIVQQCTLPLTGK 200
Score = 32.7 bits (71), Expect = 8.7
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 450 GKMVKGMGGAMDLV 491
GKMVKGMGGAMDLV
Sbjct: 155 GKMVKGMGGAMDLV 168
>UniRef50_Q8RGL8 Cluster: Butyrate-acetoacetate CoA-transferase
subunit B; n=3; Bacteria|Rep: Butyrate-acetoacetate
CoA-transferase subunit B - Fusobacterium nucleatum
subsp. nucleatum
Length = 219
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTG 586
++ EH K+G+ KIL +CTLPLTG
Sbjct: 141 IIIATEHCEKSGNSKILKKCTLPLTG 166
>UniRef50_Q3JT23 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 329
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = -2
Query: 594 TVFPVSGKVHSGRILCDPFLAVCSIVPTT*F 502
T PVSG VH RILC A CSI TT F
Sbjct: 184 TPTPVSGSVHCSRILCWSPFATCSISTTTRF 214
>UniRef50_A0LKM1 Cluster: 3-oxoacid CoA-transferase, B subunit; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: 3-oxoacid
CoA-transferase, B subunit - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 226
Score = 33.1 bits (72), Expect = 6.6
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 509 VVGTMEHTAKNGSHKILPECTLPLTG 586
++G M+HT ++G K++ CTLP+TG
Sbjct: 148 IIG-MQHTTRDGKPKLVKRCTLPVTG 172
>UniRef50_A6LNI1 Cluster: Beta-glucosidase; n=3; Thermotogaceae|Rep:
Beta-glucosidase - Thermosipho melanesiensis BI429
Length = 439
Score = 32.7 bits (71), Expect = 8.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 223 RNTTMYMTIVHWSATFNLYSKATW*NQNLIHFLDPFCKMILILL 354
+N ++T+ HW + LY K W N ++ + + M+ LL
Sbjct: 112 KNIIPFITLYHWDLPYYLYEKGGWVNDDIALYFRDYAAMMFELL 155
>UniRef50_A5ZMW4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 456
Score = 32.7 bits (71), Expect = 8.7
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +1
Query: 238 YMTIVHWSATFNLYSKATW*NQNLIHFLDPFCKMI 342
Y+T+ HW + LY + W N ++ + + ++I
Sbjct: 118 YITLYHWELPYELYKRGGWLNPQIVDWFGDYARLI 152
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,682,955
Number of Sequences: 1657284
Number of extensions: 12939567
Number of successful extensions: 25154
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25147
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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