Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00950
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62961-1|AAB07366.1| 520|Homo sapiens succinyl CoA:3-oxoacid Co... 46 1e-04
CR457049-1|CAG33330.1| 520|Homo sapiens OXCT protein. 46 1e-04
BC009001-1|AAH09001.1| 520|Homo sapiens 3-oxoacid CoA transfera... 46 1e-04
AB029576-1|BAB13733.1| 520|Homo sapiens succinyl-CoA:3-ketoacid... 46 1e-04
AK024440-1|BAB15730.1| 249|Homo sapiens FLJ00030 protein protein. 44 4e-04
AL033527-1|CAI19402.1| 517|Homo sapiens 3-oxoacid CoA transfera... 41 0.004
AB050193-1|BAB40810.2| 517|Homo sapiens succinyl CoA: 3-oxo aci... 41 0.004
>U62961-1|AAB07366.1| 520|Homo sapiens succinyl CoA:3-oxoacid CoA
transferase precursor protein.
Length = 520
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY-RKMRL 626
GKMVKGMGGAMDLVS+ +TK V + + K + K C K
Sbjct: 417 GKMVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVF 476
Query: 627 RSRQRKGLILTELAEGVKVED 689
++KGL L EL EG+ V+D
Sbjct: 477 DVDKKKGLTLIELWEGLTVDD 497
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TMEH+AK +HKI+ +CTLPLTGK
Sbjct: 434 KTKVVVTMEHSAKGNAHKIMEKCTLPLTGK 463
>CR457049-1|CAG33330.1| 520|Homo sapiens OXCT protein.
Length = 520
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY-RKMRL 626
GKMVKGMGGAMDLVS+ +TK V + + K + K C K
Sbjct: 417 GKMVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVF 476
Query: 627 RSRQRKGLILTELAEGVKVED 689
++KGL L EL EG+ V+D
Sbjct: 477 DVDKKKGLTLIELWEGLTVDD 497
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TMEH+AK +HKI+ +CTLPLTGK
Sbjct: 434 KTKVVVTMEHSAKGNAHKIMEKCTLPLTGK 463
>BC009001-1|AAH09001.1| 520|Homo sapiens 3-oxoacid CoA transferase
1 protein.
Length = 520
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY-RKMRL 626
GKMVKGMGGAMDLVS+ +TK V + + K + K C K
Sbjct: 417 GKMVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVF 476
Query: 627 RSRQRKGLILTELAEGVKVED 689
++KGL L EL EG+ V+D
Sbjct: 477 DVDKKKGLTLIELWEGLTVDD 497
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TMEH+AK +HKI+ +CTLPLTGK
Sbjct: 434 KTKVVVTMEHSAKGNAHKIMEKCTLPLTGK 463
>AB029576-1|BAB13733.1| 520|Homo sapiens succinyl-CoA:3-ketoacid
CoA transferase protein.
Length = 520
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY-RKMRL 626
GKMVKGMGGAMDLVS+ +TK V + + K + K C K
Sbjct: 417 GKMVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVF 476
Query: 627 RSRQRKGLILTELAEGVKVED 689
++KGL L EL EG+ V+D
Sbjct: 477 DVDKKKGLTLIELWEGLTVDD 497
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TMEH+AK +HKI+ +CTLPLTGK
Sbjct: 434 KTKVVVTMEHSAKGNAHKIMEKCTLPLTGK 463
>AK024440-1|BAB15730.1| 249|Homo sapiens FLJ00030 protein protein.
Length = 249
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY--RKMR 623
GK VKGMGGAMDLVS+ +T+ V + + K + K C D K
Sbjct: 146 GKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRC-VDRIITEKAV 204
Query: 624 LRSRQRKGLILTELAEGVKVED 689
++KGL L EL EG+ V+D
Sbjct: 205 FDVHRKKGLTLRELWEGLTVDD 226
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TM+H K+ + KI+ +CT+PLTGK
Sbjct: 163 KTRVVVTMQHCTKDNTPKIMEKCTMPLTGK 192
>AL033527-1|CAI19402.1| 517|Homo sapiens 3-oxoacid CoA transferase
2 protein.
Length = 517
Score = 41.1 bits (92), Expect = 0.004
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY--RKMR 623
GK VKGMGGAMDLVS+ +T+ V + + K + K C D K
Sbjct: 414 GKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRC-VDRIITEKAV 472
Query: 624 LRSRQRKGLILTELAEGVKVED 689
++K L L EL EG+ V+D
Sbjct: 473 FDVHRKKELTLRELWEGLTVDD 494
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TM+H K+ + KI+ +CT+PLTGK
Sbjct: 431 KTRVVVTMQHCTKDNTPKIMEKCTMPLTGK 460
>AB050193-1|BAB40810.2| 517|Homo sapiens succinyl CoA: 3-oxo acid
CoA transferase protein.
Length = 517
Score = 41.1 bits (92), Expect = 0.004
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 450 GKMVKGMGGAMDLVSAPRTK*WVQWNTPPRMDRTKFSQSAPYRSQEKLC*YDHY--RKMR 623
GK VKGMGGAMDLVS+ +T+ V + + K + K C D K
Sbjct: 414 GKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRC-VDRIITEKAV 472
Query: 624 LRSRQRKGLILTELAEGVKVED 689
++K L L EL EG+ V+D
Sbjct: 473 FDVHRKKELTLRELWEGLTVDD 494
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 500 KN*VVGTMEHTAKNGSHKILPECTLPLTGK 589
K VV TM+H K+ + KI+ +CT+PLTGK
Sbjct: 431 KTRVVVTMQHCTKDNTPKIMEKCTMPLTGK 460
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,719,207
Number of Sequences: 237096
Number of extensions: 2009307
Number of successful extensions: 7158
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7144
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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