Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00949
(684 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 154 9e-38
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 153 3e-37
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 153 3e-37
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 153 3e-37
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 153 3e-37
AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p pro... 31 1.9
AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-P... 31 1.9
M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up prote... 30 3.4
EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein. 30 3.4
BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p pro... 30 3.4
AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p pro... 30 3.4
AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA... 30 3.4
AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-P... 30 3.4
AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-P... 30 3.4
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro... 29 5.9
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P... 29 5.9
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 154 bits (374), Expect = 9e-38
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +3
Query: 255 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQ 434
F+ KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM D+GDLREDLK+P+G+LG Q
Sbjct: 65 FSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQ 124
Query: 435 LRTDFDSGKELLCTVLKSCGEECVMPSK 518
LR DFDSGK+LLCTVLK+CGEECV+ K
Sbjct: 125 LRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 121 bits (291), Expect = 1e-27
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +1
Query: 61 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 240
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 241 VGIDI 255
VGIDI
Sbjct: 60 VGIDI 64
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 153 bits (370), Expect = 3e-37
Identities = 67/88 (76%), Positives = 78/88 (88%)
Frame = +3
Query: 255 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQ 434
F+ KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG Q
Sbjct: 65 FSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQ 124
Query: 435 LRTDFDSGKELLCTVLKSCGEECVMPSK 518
LR DFDSGK+LLCTVLK+CGEECV+ K
Sbjct: 125 LRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 118 bits (283), Expect = 1e-26
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = +1
Query: 61 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 240
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 241 VGIDI 255
VGIDI
Sbjct: 60 VGIDI 64
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 153 bits (370), Expect = 3e-37
Identities = 67/88 (76%), Positives = 78/88 (88%)
Frame = +3
Query: 255 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQ 434
F+ KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG Q
Sbjct: 65 FSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQ 124
Query: 435 LRTDFDSGKELLCTVLKSCGEECVMPSK 518
LR DFDSGK+LLCTVLK+CGEECV+ K
Sbjct: 125 LRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 121 bits (291), Expect = 1e-27
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +1
Query: 61 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 240
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 241 VGIDI 255
VGIDI
Sbjct: 60 VGIDI 64
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 153 bits (370), Expect = 3e-37
Identities = 67/88 (76%), Positives = 78/88 (88%)
Frame = +3
Query: 255 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQ 434
F+ KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG Q
Sbjct: 65 FSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQ 124
Query: 435 LRTDFDSGKELLCTVLKSCGEECVMPSK 518
LR DFDSGK+LLCTVLK+CGEECV+ K
Sbjct: 125 LRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 118 bits (283), Expect = 1e-26
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = +1
Query: 61 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 240
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 241 VGIDI 255
VGIDI
Sbjct: 60 VGIDI 64
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 153 bits (370), Expect = 3e-37
Identities = 67/88 (76%), Positives = 78/88 (88%)
Frame = +3
Query: 255 FNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQ 434
F+ KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG Q
Sbjct: 65 FSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQ 124
Query: 435 LRTDFDSGKELLCTVLKSCGEECVMPSK 518
LR DFDSGK+LLCTVLK+CGEECV+ K
Sbjct: 125 LRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 118 bits (283), Expect = 1e-26
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = +1
Query: 61 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 240
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 241 VGIDI 255
VGIDI
Sbjct: 60 VGIDI 64
>AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p
protein.
Length = 709
Score = 30.7 bits (66), Expect = 1.9
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 212 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 60
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-PA
protein.
Length = 709
Score = 30.7 bits (66), Expect = 1.9
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 212 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 60
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up protein
type 1 protein.
Length = 543
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 238 LVGIDISMVKSMKISVPPHTTWTYP 312
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p
protein.
Length = 1883
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 648 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 687
>AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p
protein.
Length = 543
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 238 LVGIDISMVKSMKISVPPHTTWTYP 312
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA
protein.
Length = 1905
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 487 PAVRSASCRQSKHSSRQINQLSIYRVNKLLIFYNQQLLHK 606
P +RS S ++ IN+L+ R NKLL+ QQLL +
Sbjct: 670 PYLRSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLER 709
>AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-PA,
isoform A protein.
Length = 746
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 238 LVGIDISMVKSMKISVPPHTTWTYP 312
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-PB,
isoform B protein.
Length = 543
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 238 LVGIDISMVKSMKISVPPHTTWTYP 312
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
protein.
Length = 1019
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 157 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 74
RNR+Y W +W RPR LR+++V L
Sbjct: 26 RNRWYLFS--CWRKWFRPRELRARTVNL 51
>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
isoform A protein.
Length = 1087
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 157 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 74
RNR+Y W +W RPR LR+++V L
Sbjct: 26 RNRWYLFS--CWRKWFRPRELRARTVNL 51
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,646,290
Number of Sequences: 53049
Number of extensions: 772119
Number of successful extensions: 2641
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2638
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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