Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00948
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DQK6 Cluster: Chromosome undetermined scaffold_6, who...    35   2.6  
UniRef50_O96157 Cluster: Putative uncharacterized protein PFB028...    34   3.4  
UniRef50_UPI0000DB74FD Cluster: PREDICTED: similar to CG6509-PB,...    34   4.5  
UniRef50_A2EEA0 Cluster: Putative uncharacterized protein; n=5; ...    33   5.9  
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403...    33   7.9  
UniRef50_A0BPQ9 Cluster: Chromosome undetermined scaffold_12, wh...    33   7.9  

>UniRef50_A0DQK6 Cluster: Chromosome undetermined scaffold_6, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_6,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 472

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -2

Query: 577 YKPVPIYT*VVSISRILIPIDSFSLLFVPKPSPIFPKTTDFYMYFYLIKY-IKTNNN 410
           Y  V +Y  ++ I++ +   +   +L +P    ++PK  D   Y+YL+KY I+T NN
Sbjct: 89  YSKVMLY--LLDINQTVSSNEKLMILKLPTEVQVYPKVEDIDFYYYLLKYTIQTLNN 143


>UniRef50_O96157 Cluster: Putative uncharacterized protein PFB0280w;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFB0280w - Plasmodium falciparum (isolate 3D7)
          Length = 2539

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 669  STKDLFPISLRINQIFTNKFKKYCYNYIDNPTNLYLFILRSF 544
            +TKD   I  +IN     K KKY Y +I+N   LY + L  F
Sbjct: 952  TTKDQNKIHTKINSKENEKVKKYYYYHINNDLGLYFYFLVGF 993


>UniRef50_UPI0000DB74FD Cluster: PREDICTED: similar to CG6509-PB,
            isoform B; n=2; Apocrita|Rep: PREDICTED: similar to
            CG6509-PB, isoform B - Apis mellifera
          Length = 1957

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -3

Query: 675  SISTKDLFPISLRINQIFTNKFKKYCYNYIDNPTNLYLFILRSFPFH-VFSSQLTPFRCY 499
            S  TK+  P+S+ +NQ        Y YN I NP  L  F +     H V+ S   P   +
Sbjct: 900  SRKTKERLPLSVLLNQQPPKYESTYNYNRISNPIPLTNFPVNVNNRHTVYKSVEKPLSNF 959

Query: 498  LYLSRPQYSQK 466
            L  + P +SQK
Sbjct: 960  LKTAGPLFSQK 970


>UniRef50_A2EEA0 Cluster: Putative uncharacterized protein; n=5;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 336

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = -3

Query: 645 SLRINQIFTNKFKKYCYNYIDNPTNLYL----FILRSFPFHVFSS--QLTPFRCYLYLSR 484
           S+    +F N F+  C N+ID+  NLYL    F   +  ++ FS+  Q+    CY  +S 
Sbjct: 206 SIEFTILFCNYFENKCENFIDSQFNLYLNNCNFYKNNVKYNYFSTDGQMQVQGCYFDISD 265

Query: 483 P 481
           P
Sbjct: 266 P 266


>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
            n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY04032 - Plasmodium yoelii yoelii
          Length = 1508

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
 Frame = -3

Query: 639  RINQIFTNKFKKYCYNYIDNPTNLYLFILRSFPFHVFSSQ--LTPFRCYL-------YLS 487
            +IN    N F    YN   NP  LYLF+  S+ ++  + +  LT FRC          L 
Sbjct: 1414 KINNYVENMFSSNDYNIDMNP--LYLFMSLSYSYYFVTKEKILTVFRCIKKEMHKIDILM 1471

Query: 486  RPQYSQKQQI-FTCIFI*SNTLKPITTE 406
              +  Q + I F+C++I  N L  +TT+
Sbjct: 1472 WLEIKQIKNIYFSCLYILHNNLIKLTTD 1499


>UniRef50_A0BPQ9 Cluster: Chromosome undetermined scaffold_12, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_12,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 371

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 472 PKTTDFYMYFYLIKYIKTNNN*DL 401
           PK  DFY YF + KY+ T+NN +L
Sbjct: 51  PKEDDFYTYFIIEKYLPTDNNLEL 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,008,597
Number of Sequences: 1657284
Number of extensions: 12857453
Number of successful extensions: 26896
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26880
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)