Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00948
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.0  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    24   6.0  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   6.0  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 463 TDFYMYFYLIKYIKTNNN*DLPLIYMLVQTLNN 365
           TD+  Y Y   Y K N +  +P +Y   Q +NN
Sbjct: 756 TDYKFYVYYDFYGKDNPHFHVPSLYGFQQVVNN 788


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 355 IYKRYLVFEPAYILKVSLSCYWF 423
           I+   L+ E + ++K + SC+W+
Sbjct: 255 IFGNRLIEESSSVMKAAYSCHWY 277


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 755 TFLS-TLRFSLILLHVSAKSTYLY 687
           T LS   R  LI+ HV  KS YLY
Sbjct: 524 TLLSIAARRKLIVKHVDVKSAYLY 547


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,479
Number of Sequences: 2352
Number of extensions: 13477
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)