Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00947
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   6.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 587 NLQLADQTLAQRPNDLSGLLRN 652
           NLQ  D+ L  R +  + LLRN
Sbjct: 113 NLQYIDEVLKNRDSHETNLLRN 134


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 587 NLQLADQTLAQRPNDLSGLLRN 652
           NLQ  D+ L  R +  + LLRN
Sbjct: 113 NLQYIDEVLKNRDSHETNLLRN 134


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 670 GYGDAH*P*YAEPH 711
           G+ D+H P Y  PH
Sbjct: 222 GFADSHSPLYKRPH 235


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 97  KQQLDGDSLSPDSRESVEV 153
           +QQ+DG    PDS  S+ +
Sbjct: 100 QQQMDGQEYRPDSPSSMHM 118


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 97  KQQLDGDSLSPDSRESVEV 153
           +QQ+DG    PDS  S+ +
Sbjct: 102 QQQMDGQEYRPDSPSSMHM 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,350
Number of Sequences: 336
Number of extensions: 2604
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)