Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00947
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 60 2e-09
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 55 5e-08
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 54 2e-07
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 51 1e-06
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 50 3e-06
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 47 2e-05
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 46 3e-05
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 45 8e-05
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 44 1e-04
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 44 2e-04
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34) 43 3e-04
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 42 7e-04
SB_42258| Best HMM Match : TPR_2 (HMM E-Value=0.006) 40 0.003
SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) 39 0.005
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 35 0.081
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 35 0.081
SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021) 34 0.14
SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20) 33 0.33
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 33 0.33
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 33 0.33
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 32 0.43
SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06) 32 0.57
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 29 3.0
SB_58247| Best HMM Match : TPR_1 (HMM E-Value=1.2e-19) 29 4.0
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 29 5.3
SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0) 29 5.3
SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 29 5.3
SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0) 28 7.0
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 28 7.0
SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 28 7.0
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_27103| Best HMM Match : Lipoprotein_3 (HMM E-Value=10) 28 9.3
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_21478| Best HMM Match : Branch (HMM E-Value=0) 28 9.3
SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_26625| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Frame = +3
Query: 246 AARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEA 425
A KA+A +LK++GN + A +A+E YT AI +DP N V+Y NR+AA +L
Sbjct: 2 ADEEKAKAAKLKDQGNAALSAGDTQKAIEFYTEAILLDPANHVFYSNRSAAFAKLSKYNE 61
Query: 426 AVSDCTTALALQPDYSKAYGRLGLALTASR--DTARRALPTPA---PLNSTLRTSPTEKT 590
A+ D + ++PD+ K Y RLG A + + A A T P N+ L++ E
Sbjct: 62 ALEDARKCVEIKPDWGKGYSRLGTAYSFLKMYQKAEEAFTTGLRHDPNNAQLKSGLEEVQ 121
Query: 591 SNS 599
SN+
Sbjct: 122 SNA 124
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +3
Query: 249 ARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAA 428
A N+ +A K GN K + ++ A + + A E++P N +Y N AAA F + E
Sbjct: 224 AENEKKAMEEKELGNAAYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFEEGNYEEC 283
Query: 429 VSDCTTALALQPDYSKAYGRLGLA 500
+ +C A+ + + +G A
Sbjct: 284 IKECLEAVEVGRSNRAEFALIGKA 307
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 279 KNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTAL 452
K +GNE K + A + YT AI+ +P +A Y NRAA +L A+ + L
Sbjct: 369 KEKGNEYFKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLALEEAKEGL 426
>SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 64.9 bits (151), Expect = 7e-11
Identities = 27/47 (57%), Positives = 38/47 (80%)
Frame = +3
Query: 249 ARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNR 389
A+++ +AE LKNEGN+LMK E++ EA+ Y+RAIE+D N+VY CNR
Sbjct: 85 AQDRQKAEELKNEGNQLMKEEKFQEAINSYSRAIELDNTNSVYPCNR 131
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 49 MSNEIKIVAASIVNFLKQQLDGDSLSPDSRESVEVGVQCIETAFELTTEDAARGLDLLQL 228
MSN ++ A I+ L QQLD ++S DS ES+EV +QC+E F + D A+ L L+
Sbjct: 1 MSNSERLSFA-IIEHLTQQLDSGTVSGDSAESLEVAIQCLEQVFNINRGDEAQ-LKRLKT 58
Query: 229 VR--QRLGPPATRLKPNDSRT 285
R Q + A L+ N T
Sbjct: 59 ERSLQEIFDTAENLQTNGGAT 79
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +3
Query: 264 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 443
+A + +GN+ +K E + EAL+ YT+ IE+ + + NRA H +L P+ A++DC
Sbjct: 863 KANDFREKGNDAVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALADCE 922
Query: 444 TALALQPDYSKAYGRLGLAL 503
+ L L+ + KA R AL
Sbjct: 923 SCLKLEEHFGKALQRKAWAL 942
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPR----NAVYYCNRAAAHFRLCDP 419
R + K EGN+ Y +A E YT A+EIDP+ NA Y NRA +L
Sbjct: 28 RKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKN 87
Query: 420 EAAVSDCTTALALQPDYSKAY 482
+ A+ DCT A+ L Y+KAY
Sbjct: 88 DQAIEDCTQAMNLDHTYTKAY 108
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPR----NAVYYCNRAAAHFRLCDP 419
R + K EGN+ Y +A E YT A+EIDP+ NA Y NRA +L
Sbjct: 28 RKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKN 87
Query: 420 EAAVSDCTTALALQPDYSKAY 482
+ A+ DCT A+ L Y+KAY
Sbjct: 88 DQAIEDCTQAMNLDHTYTKAY 108
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +3
Query: 264 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 443
++ ++ GNE+ Y A+E +T+AI++D R+ ++ NR+ RL E A+ D
Sbjct: 268 QSRQIAVRGNEMANLGNYQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDAD 327
Query: 444 TALALQPDYSKAYGRLGLAL 503
A++L PD+ K + R G AL
Sbjct: 328 VAISLAPDWPKGFFRRGRAL 347
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLC---DPEAAVSD 437
A LK GNE +++ A+ Y A+ + P +AV Y NRAAA + D AA+ D
Sbjct: 334 ALHLKTIGNEAFCKQQFLTAVNMYNEALNLAPNSAVLYANRAAAFIKRSWEGDVYAALRD 393
Query: 438 CTTALALQPDYSKAYGR 488
C AL L P+++KA+ R
Sbjct: 394 CHKALTLDPNHTKAHFR 410
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +3
Query: 270 ERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTA 449
E+ K G+ K + + +A+E Y+ AI++DP N V Y NR+AA R E A+ D A
Sbjct: 24 EKAKWAGDACSKGD-FQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQLEQALEDGKKA 82
Query: 450 LALQPDYSKAYGRLGLAL 503
L P + KA+ R G+AL
Sbjct: 83 AELNPLWPKAHYRQGVAL 100
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYY--------CNRAAAHFRLCDPE 422
A R K+EG L K RY EA+EKY++AI++ ++ ++ NRA+ R+ D
Sbjct: 415 AVRAKDEGMRLYKIGRYAEAVEKYSQAIDVLWKDKSHFKSALASLLYNRASCLGRIGDAS 474
Query: 423 AAVSDCTTALALQPDYSKAY 482
V DCT++L L PD KA+
Sbjct: 475 GCVKDCTSSLNLIPDSLKAH 494
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAA 398
A R K++GN+ ++ Y E+L YTR+IE+ P A Y NRA A
Sbjct: 215 ANREKDKGNDAFRSGDYKESLVYYTRSIELKP-TAASYNNRAMA 257
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 420 EAAVSDCTTALALQPDYSKAYGRLGLALTA--SRDTARRALPTPAPLNS 560
+ A D TAL LQPD KA R LA A DTA + L + ++S
Sbjct: 767 DLAEKDANTALGLQPDNVKALYRRALARKALGKYDTAAKDLLSLVKIDS 815
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +3
Query: 264 EAERLKNEGNELMKAERYNEALEKYTRAIEI-DPRN----AVYYCNRAAAHFRLCDPEAA 428
+A+ K +GN+ K +Y +A++ YT AIE+ P N + +Y NRAAA+ ++ E
Sbjct: 140 QAQVAKLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMNQFENV 199
Query: 429 VSDCTTALALQPDYSKAYGRLGLAL 503
V + T AL L Y+KA R AL
Sbjct: 200 VEEATKALELNSKYTKALMRRARAL 224
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Frame = +3
Query: 255 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN----------AVYYCNRAAAHF 404
N A +K EGN+ KA Y AL Y A+++ N AV Y NRAA
Sbjct: 5 NPKSAVEIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQL 64
Query: 405 RLCDPEAAVSDCTTALALQPDYSKAYGRLGLALTAS 512
+L EAA+ D T AL + P+ KA R A A+
Sbjct: 65 KLEKYEAAIKDATKALDIVPNDPKALFRRSQAFEAT 100
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/79 (35%), Positives = 38/79 (48%)
Frame = +3
Query: 264 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 443
EAE LK + N K YN A+ YT+AIE+ YY NR+ + + A++D
Sbjct: 186 EAEDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADAN 245
Query: 444 TALALQPDYSKAYGRLGLA 500
A+ L Y K Y R A
Sbjct: 246 KAIQLDRKYIKGYYRRATA 264
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 446
AE K EGN + Y A+ Y++AIE P A +Y NR+AA+ + + + A+ D
Sbjct: 34 AEAKKAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAYMMISNYDKALEDALL 93
Query: 447 ALALQPDYSKAYGR 488
++ + ++ K + R
Sbjct: 94 SIEIDNNFVKGHYR 107
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 446
+E K +GN+ +Y A+ YT AI P N + Y NRA ++ + D ++D
Sbjct: 500 SEDRKLQGNDHFNHGKYKAAISAYTLAISGAPYNHILYGNRAQSYLKSEDLREGLTDGRR 559
Query: 447 ALALQPDYSKAYGRLGLA 500
A+ L+PD++K R A
Sbjct: 560 AVVLKPDWTKGQFRYAQA 577
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +3
Query: 285 EGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQP 464
EG+ L K E Y +AL+ Y+ A+E+ P + R+ + +L +AA D AL
Sbjct: 22 EGDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALEEDK 81
Query: 465 DYSKAYGRLGLALTASRD 518
D++K + AL A D
Sbjct: 82 DFNKGLYQKAEALYAMGD 99
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +3
Query: 279 KNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALAL 458
++EGN+ M ++ Y A++ Y ++I P N +C RA A L E ++ D + L
Sbjct: 288 RSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLDFEECIKL 347
Query: 459 QPDYSKAYGRLGLA 500
P + K Y GL+
Sbjct: 348 NPKWVKGYLFRGLS 361
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 446
A+ N GN L + + A++ Y+RAI+I+P A + N A+ H + A+ T
Sbjct: 398 ADAFSNMGNLLKEMQDIQGAIQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRT 457
Query: 447 ALALQPDYSKAYGRLGLAL 503
AL L+P + AY L L
Sbjct: 458 ALKLKPSFPDAYCNLAHCL 476
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 234 SATGAARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLC 413
S +N AE N GN + + +AL Y A+++ P Y N AAA
Sbjct: 104 STLAIKQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVKLKPDFIDGYINLAAALVAAG 163
Query: 414 DPEAAVSDCTTALALQPD-YSKA 479
D E AV TAL P Y KA
Sbjct: 164 DLEGAVHAYATALQYNPACYLKA 186
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 324 ALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQPDYSKAYGRL 491
A++ Y RAIE+ P YCN A A A TAL L P ++ + L
Sbjct: 281 AVDTYRRAIELQPNFPDAYCNLANALKEQGKVSEAEECYNTALQLSPTHADSLNNL 336
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 321 EALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQPDYSKAYGRLGLA 500
EA++ +T AI +P +A + RA+ R+ P AA+ DC A + PD ++ Y G A
Sbjct: 66 EAIKLFTDAIMKNPHSAPLFAKRASCFIRMKKPNAAIRDCDKAAQINPDSAQIYKWRGRA 125
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 237 ATGAARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRA 392
A+ + +A A +LK +GN K ++Y EA++ YT+A+ D N +Y NRA
Sbjct: 110 ASERKQREAVALQLKEKGNLAFKQQKYEEAVKLYTQALNQDRTNTAFYTNRA 161
>SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34)
Length = 935
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN-----AVYYCNRAAAHFRLCD 416
++ +EA++ K G EL KA +Y+ E Y+ A+ + + CNR+ A +
Sbjct: 393 KSASEAKKWKERGKELFKANKYSLLDEYYSLALSYAHHSDKELVSQLLCNRSLAFLKKNF 452
Query: 417 PEAAVSDCTTALALQPDYSKAYGRLGLALTAS 512
++A++D + +P +SK + RLG L S
Sbjct: 453 LKSALTDAKECVKTRPSWSKGHYRLGSCLAQS 484
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 321 EALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQPDYSKAY-GRL 491
+AL+ Y + + P+++ YC RA + EAA+SD TAL +QP +++ GR+
Sbjct: 384 QALDVYNDVVRLRPKSSRSYCARAVCYLNSGSNEAALSDYNTALGIQPGCARSLCGRM 441
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 324 ALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTA 449
AL Y A+ I P A C R AHF + + ++D +A
Sbjct: 419 ALSDYNTALGIQPGCARSLCGRMRAHFAIGQQDKGIADLISA 460
>SB_42258| Best HMM Match : TPR_2 (HMM E-Value=0.006)
Length = 154
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 315 YNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQPD 467
Y E+++ T AI +PR YY +RA A + + D + A D L L+PD
Sbjct: 50 YLESIDYLTTAISYNPRIGPYYLSRARARYMIEDSDGAREDVLKCLYLEPD 100
>SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06)
Length = 357
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 240 TGAARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN-----AVYYCNRAAAHF 404
T + ++ + A L+NEGN + + ALE YT++I + P ++ Y NR+A F
Sbjct: 58 TASTKSSSTAASLRNEGNTYFQKRQLGRALEVYTQSILVAPSTDLKVLSLAYANRSAVLF 117
Query: 405 RLCDPEAAVSD 437
+ + E + D
Sbjct: 118 HMKEYELCLRD 128
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 34.7 bits (76), Expect = 0.081
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 303 KAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQP 464
K E++N A + +A+ I+P ++V YC+ + EAA++ A+ + P
Sbjct: 1447 KQEKFNLAEVHFRKALSINPSSSVLYCHVGVVQHAMRKSEAALATINKAMLIDP 1500
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +3
Query: 288 GNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQPD 467
G+E + E + A+ Y AI DPR+ + +++ A AL++ P
Sbjct: 1408 GHEYVLTEELDRAMSCYRMAIRSDPRHYNAWYGVGMIYYKQEKFNLAEVHFRKALSINPS 1467
Query: 468 YSKAYGRLGLALTASR 515
S Y +G+ A R
Sbjct: 1468 SSVLYCHVGVVQHAMR 1483
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 34.7 bits (76), Expect = 0.081
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 378 YCNRAAAHFRLCDPEAAVSDCTTALALQPDYSKAYGRLGLALTASRDTARRALPTPAPLN 557
Y N AA +L + +A+ DC AL L + +KA R G A +D L T + N
Sbjct: 370 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAMLQTVSDSN 429
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAI 350
AE+LK GNE K ++Y A +KY +A+
Sbjct: 300 AEKLKVIGNEQFKQQKYEVAKKKYKKAL 327
>SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021)
Length = 304
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 279 KNEGNELMKAERYNEALEKYTRAIEIDPR----NAVYYCNRAAAHFRLCDPEAAVSDCTT 446
K EGN K + + +A++ YT I++ + NA+ Y NRA +F L +
Sbjct: 88 KEEGNYEYKRKNFKKAIDAYTEGIKLRCQDGHVNAILYTNRATVNFSLVIQQNLCKFSLI 147
Query: 447 ALALQPD 467
++PD
Sbjct: 148 TTNIEPD 154
>SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20)
Length = 1195
Score = 32.7 bits (71), Expect = 0.33
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +3
Query: 246 AARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEI-DPRNA--VYYCNRAAAHF--RL 410
A R K A+ G MKA+R+ +A+ + +AIEI P N+ A +F +
Sbjct: 1027 ATRVKPSAQIFVLLGKTNMKAKRFEDAISSFLKAIEILTPWNSRNPMPLEAAGVYFLIGM 1086
Query: 411 CDPE-----AAVSDCTTALALQPDYSKAYGRLGL 497
C E A+ A+ + PDY++A+ + GL
Sbjct: 1087 CQSEVHNDSGALDAYNEAIKVNPDYAEAFYQRGL 1120
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 378 YCNRAAAHFRLCDPEAAVSDCTTALALQPDYSKAYGRLGLALTASRD 518
Y N AA +L + +A+ DC AL L + +KA R G A +D
Sbjct: 43 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKD 89
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 255 NKAEAERLKNEGNELMKAERYN--EALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAA 428
++ E+ RL+ GN L+ + ++ E LEKY A +++PR+ + N + L + A
Sbjct: 161 SELESARLRICGNLLLNNDEFSKDEILEKYKEAEKLNPRDHLLQSNMSHVLLSLGKFQEA 220
Query: 429 VSDCTTALALQPDYSK 476
+ A ++P++ K
Sbjct: 221 LDKAEQACHIRPNWPK 236
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 32.3 bits (70), Expect = 0.43
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = +1
Query: 280 RTKATSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIAR-----LRISGCATPRQR*ATVP 444
+TK + K S+ TK ++T+ R T+ +R T + R S A PRQ
Sbjct: 182 KTKTSLKTKTSLKTKTSRNTKTS-RKTKTSRKTKTKPQDQDQAARPSQAARPRQAARPRQ 240
Query: 445 QHSPYSLTIARRTDALGSRSPPRETLRGARCLRPRRSTRP 564
P R+ + G S PR+ R + RP ++ P
Sbjct: 241 ASRPRQAARPRQRERTGQASRPRQRERPGQAARPGQAATP 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 280 RTKATSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIARLRISGCATPRQR*ATVPQ--HS 453
+T+ +S K S TK ++T+ R T+ + +T + + S + T PQ +
Sbjct: 69 KTRTSSKTKTSHKTKTSRNTKTS-RKTKTSSNTKTSLKTKTSRNTKTSRNTKTKPQDKNK 127
Query: 454 PYSLTIARRTDALGSRSPPRETLRGARCLRPRRSTRP 564
P + D G+R PR+ R + RPR+++RP
Sbjct: 128 PQDQDKPQDQDQ-GAR--PRQATRPRQAARPRQASRP 161
>SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06)
Length = 118
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 264 EAERLKNEGNELMKAERYNEALEKYTRAI 350
+A LK EGN K + Y EA++KY RA+
Sbjct: 31 QAFSLKEEGNGCFKQKNYREAMKKYHRAM 59
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 31.9 bits (69), Expect = 0.57
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYT---RAIE----------IDPRNAVYYCNRAAAHFR 407
A ++K++G + K +Y A +Y R +E +DP + N AA H +
Sbjct: 971 ALKVKDKGTKFFKDGKYKIACRQYAVVIRVLEGYFDEEEEKAVDPIKCAGHLNIAACHLK 1030
Query: 408 LCDPEAAVSDCTTALALQPDYSKAYGRLGLALTASRD 518
L + + C AL + + KA R G AL +D
Sbjct: 1031 LGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKD 1067
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 198 CGSRPGLTAACPSATGAARN--KAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN 368
C + G C A A + K + L G L+ + Y ++ E +T+ +E+DP+N
Sbjct: 1027 CHLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDFTQVLELDPKN 1085
>SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 31.1 bits (67), Expect = 1.00
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEI 356
RN+ ERL + L+KAE+Y E +K A+E+
Sbjct: 165 RNEKTLERLFTKAGNLVKAEKYKELAKKRAHAMEM 199
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 249 ARNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAV 374
A N + E + N+LMK E N L++ +A+E++ N V
Sbjct: 457 ATNASLQETVNESTNKLMKMEEQNTRLQEQIKAVEVERVNLV 498
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 261 AEAERLKNEGNELMKAERYNEALEKYTRAI 350
A + K EGNEL +Y +A EKY A+
Sbjct: 219 AAIPKYKEEGNELYVDGKYKDAAEKYAEAL 248
>SB_58247| Best HMM Match : TPR_1 (HMM E-Value=1.2e-19)
Length = 284
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Frame = +3
Query: 267 AERLKNEGNELMKAERYNEALEKYTRAIEI--DPRNAVYYCNRAAAHFRLCDPEAAVSDC 440
AE N G +++Y+ L + RA+ + D A + N + D A
Sbjct: 130 AELFNNLGLCCFYSQQYDMTLSCFERALSLASDENMADVWYNIGHVALGIGDSALAYQCF 189
Query: 441 TTALALQPDYSKAYGRLGL--ALTASRDTARRALPTPAPL 554
ALA D+S+AY LG+ D AR L A L
Sbjct: 190 RLALAANNDHSEAYNNLGVLEMRKGHNDQARAFLQAAAGL 229
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = +3
Query: 255 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 434
N EA+R + K E +N+ E Y AI + Y N A H +C+ + A
Sbjct: 398 NLKEAKRFYESSLDRSKQESHND--ESYYNAISV---TTTY--NLARLHEAMCEIDKAEQ 450
Query: 435 DCTTALALQPDYSKAYGRLG 494
L P+Y Y RLG
Sbjct: 451 LYKNILREHPNYVDCYLRLG 470
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEI 356
RN+ +A+ +GNEL ++ EALE+Y +A+++
Sbjct: 8 RNE-QAQVYLRKGNELYDLGKHREALEQYQQALQV 41
>SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 357
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEI 356
RN+ +A+ +GNEL ++ EALE+Y +A+++
Sbjct: 8 RNE-QAQVYLRKGNELYDLGKHREALEQYQQALQV 41
>SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEI 356
RN+ +A+ +GNEL ++ EALE+Y +A+++
Sbjct: 8 RNE-QAQVYLRKGNELYDLGKHREALEQYQQALQV 41
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 486 RLGLALTASRDTARRALPTPAPLNSTLRTSPTEKTSN 596
++ L LT+S R A+P P+P S + PT +S+
Sbjct: 132 KMQLPLTSSDPQTRPAMPLPSPSRSEMPLPPTPSSSS 168
>SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 201 RIFRRQLESGLNALHADFDTLSRIRAQR 118
R+ RQL + ++ +H D D +S +R R
Sbjct: 246 RVLNRQLTAQIDKIHGDIDAISELRMPR 273
>SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 373
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEI 356
RN+ +A+ +GNEL ++ EALE+Y +A+++
Sbjct: 8 RNE-QAQVYFRKGNELYDLGKHREALEQYQQALQV 41
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 288 GNELMKAERYNEALEKYTRAIEIDPRN 368
G +E Y EAL+ Y A++IDP N
Sbjct: 421 GTAAYHSEEYVEALKDYESALKIDPNN 447
>SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 264 EAERLKNEGNELMKAERYNEALEKYTRAIEI 356
+A+ +GNEL ++ EALE+Y +A+++
Sbjct: 11 QAQVYFRKGNELYNLGKHREALEQYQQALQV 41
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 247 PPATRLKPNDSRTKATSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIARLRISGCAT 417
PP SR A K + TTK+ + ++ ++ T T + LR+SG T
Sbjct: 583 PPTPTSSRASSRGSAGGGAKTTKTTKKCSTRKSRGQNGDTTTKTKCVTTLRVSGHGT 639
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 285 EGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQP 464
E M+ + A+E+ T AIE+ P + RA + R D A+SD L
Sbjct: 2 EAKYAMERGDCHSAIEQLTHAIEVAPWDPELRMMRADCYERQGDLIKAISDIKPTTKLIN 61
Query: 465 DYSKAYGRL 491
D ++A+ R+
Sbjct: 62 DNTQAFLRM 70
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +3
Query: 252 RNKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAV 431
R A E++KN+ +L + E YN+ALEK+ A A + N HF + + A
Sbjct: 513 RGAAYREQVKNKLVKLAE-EFYNKALEKHHEAKSGLKEIAELHNNIGVTHFSMGEYNKAA 571
Query: 432 SDCTTALAL 458
+ AL L
Sbjct: 572 NSFEEALKL 580
>SB_27103| Best HMM Match : Lipoprotein_3 (HMM E-Value=10)
Length = 476
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 255 NKAEAERLKNEG-NELMKAERYNEALEKYTRAIEIDPRNAVYYCN 386
+K + K G N+ + E+L+ Y+ A+ P+ YYCN
Sbjct: 378 DKTQIANSKERGKNQRPCQDSIMESLDPYSGALSTGPQGQAYYCN 422
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 27.9 bits (59), Expect = 9.3
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Frame = +1
Query: 232 RQRLGPPATRLKPNDSRTKA-TSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIARLRISG 408
+QR PP+ + + SR ++ T + ++ R ++ A R T T+ T R +
Sbjct: 88 QQRRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRLT--TKKKTPPRRTNVLE 145
Query: 409 CATPRQR*ATVPQHSPYSLTIAR--RTDALGSRSPPRETLRGARCLRPRRSTRP*ERVLP 582
T A P S S+++A +LGS +PP T L PR +R + P
Sbjct: 146 AFTAA---AGTPAGSSSSISLASPGMRSSLGSLTPPSRTSTPRSRLTPRSRSRS-RTITP 201
Query: 583 RKPPT 597
P T
Sbjct: 202 STPST 206
>SB_21478| Best HMM Match : Branch (HMM E-Value=0)
Length = 666
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 469 IARRTDALGSRSPPRETLRGARCLRPRRSTRP*ERV 576
I ++T + +SP RE ARC R RR + +RV
Sbjct: 45 IEQKTKVIAKKSPFREVCLMARCTRRRRRSSERKRV 80
>SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/91 (27%), Positives = 37/91 (40%)
Frame = +3
Query: 306 AERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALQPDYSKAYG 485
+ R+++ +K R + R A R A + A + D A A P A
Sbjct: 193 SRRHSDTPKKRKRT-SVPRRRAASALGRLTAKKKTPPRRANLLDAFVAAAGSPTSRAATS 251
Query: 486 RLGLALTASRDTARRALPTPAPLNSTLRTSP 578
LG + S +RR++ P P TLR SP
Sbjct: 252 SLG---SISTPRSRRSIIIPTPSTPTLRGSP 279
>SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -1
Query: 478 ALL*SGCRASAVVQSLTAASGSHSL--KCAAARLQ 380
++L GCR +A V ++TAA +HS+ C+ R++
Sbjct: 382 SVLSKGCREAAFVHAVTAAGVAHSVTDACSKGRIE 416
>SB_26625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 282 NEGNELMKAERYNEALEKYTR 344
NE L + ER+N+ALEKY R
Sbjct: 407 NESPALSEKERHNKALEKYKR 427
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,955,636
Number of Sequences: 59808
Number of extensions: 406769
Number of successful extensions: 1526
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -