Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00941
(488 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 2.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.0
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.0
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 21 9.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.3
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 9.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.3
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 2.3
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = -1
Query: 293 LSTIHRATRIFRLCKFSNSMKAKPGGFSATQTEFSFPYLSNSRSRSSFLIPSTRPPTY 120
LSTI+ T F LCK +KA G + E S F ST Y
Sbjct: 374 LSTIYWFTVEFGLCKEGPDVKAYGAGLLSAYGELLHALTSGKCEHRPFEPKSTAVQKY 431
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 7.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 190 LNSVWVALNPPGFAF 234
L VW+ + PPG F
Sbjct: 641 LTLVWMIIEPPGTRF 655
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 7.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 190 LNSVWVALNPPGFAF 234
L VW+ + PPG F
Sbjct: 731 LTLVWMIIEPPGTRF 745
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 20.6 bits (41), Expect = 9.3
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 151 KEDLEREFDKYGKL 192
+++ +R F+KYG+L
Sbjct: 182 EQEAKRRFEKYGQL 195
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 2 FLFINVFKISQNR 40
FL+ N+FK +NR
Sbjct: 361 FLYYNIFKALRNR 373
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 203 SNSLRSRTHGFQHTSSRYS 221
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 203 SNSLRSRTHGFQHTSSRYS 221
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 203 SNSLRSRTHGFQHTSSHYS 221
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSHYS 232
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 188 FPYLSNSRSRSSFLIP 141
FPYL +FLIP
Sbjct: 7 FPYLCYKNGGGAFLIP 22
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 245 SNSMKAKPGGFSATQTEFS 189
SNS++++ GF T + +S
Sbjct: 214 SNSLRSRTHGFQHTSSRYS 232
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,620
Number of Sequences: 438
Number of extensions: 1715
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -