Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00940
(719 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 95 2e-18
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 39 0.14
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 37 0.44
UniRef50_Q914N0 Cluster: ORF1; n=8; Torque teno virus|Rep: ORF1 ... 36 1.3
UniRef50_Q00WJ5 Cluster: Chromosome 14 contig 1, DNA sequence; n... 35 2.3
UniRef50_Q8DAT8 Cluster: Polar flagellar sheath protein A; n=3; ... 34 3.1
UniRef50_Q2Q0I9 Cluster: Fibronectin type III domain-containing ... 34 3.1
UniRef50_A4QXZ9 Cluster: Predicted protein; n=1; Magnaporthe gri... 34 4.1
UniRef50_A7CRE7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q6VGS5 Cluster: Protein Daple; n=23; Amniota|Rep: Prote... 33 7.1
UniRef50_UPI0000F2089A Cluster: PREDICTED: hypothetical protein;... 33 9.4
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 95.1 bits (226), Expect = 2e-18
Identities = 48/95 (50%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 ELDSDHRPVVMQLGRLLNHDPVTLTMVDWKKLGTCLADAAPP-IPCGPDSTPSPEDTVES 179
ELDSDHRPVVM+LGR + PVT T+VDW LG LA++ PP +P PDSTPSP+DT E+
Sbjct: 215 ELDSDHRPVVMKLGRSPDSVPVTRTVVDWHTLGISLAESDPPSLPFSPDSTPSPQDTAEA 274
Query: 180 INIFTEHXXXXXXXXXXQVDVEDCFTASDFPPSLG 284
I+I T H QV ED P +G
Sbjct: 275 IDILTSHITSTLDRSSKQVVAEDFLHRFKLPDDIG 309
Score = 36.3 bits (80), Expect = 0.76
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = +3
Query: 258 ASDFPPS---LGIS-RRRPKHVISDPPNPLTVLLGTSST 362
A+D+ P+ G S RRRP+HV++DP +P+T+ L T S+
Sbjct: 898 AADYSPNPDHAGASHRRRPRHVLTDPSDPITLALDTFSS 936
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 288 SRRRPKHVISDPPNPLTVLLGTSSTGH 368
SRR P HV+SDP + L+VLL SSTG+
Sbjct: 33 SRRHPNHVLSDPRDSLSVLLDLSSTGY 59
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 3 ELDSDHRPVVMQLGRLLNHDPVT--LTMVDWKKLGTCLADAAPPIP 134
+L SDH PV+MQ+G N DP+ T VDW+K L + IP
Sbjct: 689 DLSSDHNPVLMQIGNEAN-DPIVCRYTSVDWRKFTKHLVNNFGTIP 733
>UniRef50_Q914N0 Cluster: ORF1; n=8; Torque teno virus|Rep: ORF1 -
Torque teno virus
Length = 719
Score = 35.5 bits (78), Expect = 1.3
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 134 LRPGFNSIPRGHSRIHKHIYRAHLFRDHKVFQTSRCGGLLHRIRLSP-ELRDQSTSPQTR 310
L P + + PRG RI I LF DH FQ CG L + + LR SPQT+
Sbjct: 199 LIPSWETRPRGKKRIPVRIGPPRLFTDHWYFQRDFCGVPLLTVNATACNLRYPFGSPQTK 258
Query: 311 H 313
+
Sbjct: 259 N 259
>UniRef50_Q00WJ5 Cluster: Chromosome 14 contig 1, DNA sequence; n=2;
Ostreococcus|Rep: Chromosome 14 contig 1, DNA sequence -
Ostreococcus tauri
Length = 325
Score = 34.7 bits (76), Expect = 2.3
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -2
Query: 247 SSTSTCLEDFMITEEMCSVNMFMDSTVSSGDGVESGPQGIGGAASAKHVPSFFQSTMVNV 68
S + C D + +E M + STVS G ++S K + + ST+ +
Sbjct: 47 SEAARCTADELPSERMVEFSSNSSSTVSIVTSFNRSIASTGASSSTKVLHASIVSTVSRL 106
Query: 67 TGSWLSRRPSCMTTGRWSESSS 2
T SW SR P +TT SE S
Sbjct: 107 TMSWRSRMP--VTTFSMSERKS 126
>UniRef50_Q8DAT8 Cluster: Polar flagellar sheath protein A; n=3;
Vibrio|Rep: Polar flagellar sheath protein A - Vibrio
vulnificus
Length = 467
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -2
Query: 265 SDAVKQSSTSTCLEDFMITEEMCSVNM--FMDSTVSSGDGVESGPQGIGGAASAKHVPSF 92
+D + SSTS +D+M+ E++ S+++ FM + +GDG+++ +G AA+ K V +
Sbjct: 393 ADYLVISSTSNLTQDYMLAEDLDSLSLKEFM-TRFGNGDGLDTSKDVMGIAANLKEVRAA 451
Query: 91 FQST 80
+ ++
Sbjct: 452 YNNS 455
>UniRef50_Q2Q0I9 Cluster: Fibronectin type III domain-containing
protein 1; n=7; Murinae|Rep: Fibronectin type III
domain-containing protein 1 - Rattus norvegicus (Rat)
Length = 1730
Score = 34.3 bits (75), Expect = 3.1
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +2
Query: 131 PLRPGFNSIPRGHSRIHKHIYRAHLFRDHKVFQ-TSRCGGLLHRIRLSPELRDQSTSPQT 307
P R +++ R SR+H A + TS R P R STSP +
Sbjct: 558 PSRHAASNMLRDKSRVHPGTKAASSSTSRQSHSSTSEEDSSAQPSRHFPLHRGSSTSPLS 617
Query: 308 RHFGSSQPTNGAFRYLKHRSSFSSNPSLATKGS 406
R + Q T+ + + R++ SS+PS T+GS
Sbjct: 618 RGWKDRQDTHASSSHTTSRTASSSHPSALTEGS 650
>UniRef50_A4QXZ9 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 122
Score = 33.9 bits (74), Expect = 4.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 293 TSPQTRHFGSSQPTNGAFRYLKHRSSFSSNPSLATKGSTSKLTL---RHSPLSFS 448
+SP GS+ PT Y +H+S + P L + +KLTL R SPL+ S
Sbjct: 36 SSPSAGPRGSALPTEAQMAYEQHKSEWEREPRLPGPNTDNKLTLGPVRSSPLAGS 90
>UniRef50_A7CRE7 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 503
Score = 33.1 bits (72), Expect = 7.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 556 ELTGLKPDDVANTDPSRAVFAESTTGSEKRPTEKIRRETQWAV 428
EL+G+ P D+ + PS VFA T G T+ R +W V
Sbjct: 181 ELSGIAPADILPSRPSERVFARHTIGLSDPLTDDDLRNGEWPV 223
>UniRef50_Q6VGS5 Cluster: Protein Daple; n=23; Amniota|Rep: Protein
Daple - Mus musculus (Mouse)
Length = 2009
Score = 33.1 bits (72), Expect = 7.1
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 3 ELDSDHRPVVMQLGRLLNH-DPVTLTMVDWKKLGTCLADAAPPIP---CGPDSTPSPEDT 170
EL++ R +V L RL++ D T +VD + L PP P PDSTPSP +
Sbjct: 184 ELEALSRNMVFHLRRLIDERDECTELIVDLTQERDYLQTQQPPSPGKFSSPDSTPSPTSS 243
Query: 171 VES 179
+ S
Sbjct: 244 LSS 246
>UniRef50_UPI0000F2089A Cluster: PREDICTED: hypothetical protein;
n=5; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1419
Score = 32.7 bits (71), Expect = 9.4
Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = -2
Query: 283 PKLGGKSDAVKQSSTSTCL---EDFMITEEMCSVNMFMDSTVSSGDGVESGPQGIGGAAS 113
P LGG S Q STST F +T V DS+ D S G AS
Sbjct: 130 PALGGSSSLFSQPSTSTAPFSGSPFAVTSNFSLVKEIKDSSSQHEDDNISTTSGFSSRAS 189
Query: 112 AKHVPS 95
K VP+
Sbjct: 190 DKDVPT 195
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,090,285
Number of Sequences: 1657284
Number of extensions: 15011496
Number of successful extensions: 48274
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 45465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48240
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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