Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00940
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +3

Query: 99  GTCLADAAPPIPCGPDSTPSPEDT----VESINIFTEH 200
           GT L D +  IP G D+T    D     V  INIF  +
Sbjct: 352 GTALPDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +3

Query: 99  GTCLADAAPPIPCGPDSTPSPEDT----VESINIFTEH 200
           GT L D +  IP G D+T    D     V  INIF  +
Sbjct: 352 GTALPDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +3

Query: 99  GTCLADAAPPIPCGPDSTPSPEDT----VESINIFTEH 200
           GT L D +  IP G D+T    D     V  INIF  +
Sbjct: 352 GTALPDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +3

Query: 99  GTCLADAAPPIPCGPDSTPSPEDT----VESINIFTEH 200
           GT L D +  IP G D+T    D     V  INIF  +
Sbjct: 352 GTALPDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 535 DDVANTDPSRAVFAESTTGSEKRPTEKIRRE 443
           DD+ +TD  +    E     EKR +E +  E
Sbjct: 10  DDLGSTDEVKVFKDEGDGEDEKRSSENLTEE 40


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 642 FYCLNRWYFFFYLS 601
           F CL  + +FFYLS
Sbjct: 79  FLCLPFYSYFFYLS 92


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 117 AAPPIPCGPDSTPSPE 164
           AA P    PD  P PE
Sbjct: 26  AASPTSANPDEEPDPE 41


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 642 FYCLNRWYFFFYLS 601
           F CL  + +FFYLS
Sbjct: 35  FLCLPFYSYFFYLS 48


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 117 AAPPIPCGPDSTPSPE 164
           AA P    PD  P PE
Sbjct: 26  AASPTSANPDEEPDPE 41


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 525 LTRTLAEPCSQNLPLDRKSDPLRRSGEKLNGLC 427
           +TRT   P  QNL  D +++    +  K+   C
Sbjct: 280 ITRTDLVPAFQNLLKDTEAEVRAAAANKVKDFC 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,426
Number of Sequences: 336
Number of extensions: 3572
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)