Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00940
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117307-1|AAI17308.1| 758|Homo sapiens KIF6 protein protein. 31 5.5
BC098418-1|AAH98418.1| 293|Homo sapiens KIF6 protein protein. 31 5.5
BC022074-1|AAH22074.1| 265|Homo sapiens KIF6 protein protein. 31 5.5
AL832634-1|CAD89950.1| 257|Homo sapiens hypothetical protein pr... 31 5.5
AL590387-3|CAJ58479.1| 814|Homo sapiens kinesin family member 6... 31 5.5
AL161439-1|CAJ58477.1| 814|Homo sapiens kinesin family member 6... 31 5.5
AL160161-4|CAJ58476.1| 814|Homo sapiens kinesin family member 6... 31 5.5
AL160161-1|CAI19716.1| 265|Homo sapiens kinesin family member 6... 31 5.5
AL136087-6|CAJ58473.1| 814|Homo sapiens kinesin family member 6... 31 5.5
AL136087-1|CAI19535.1| 265|Homo sapiens kinesin family member 6... 31 5.5
AL035464-4|CAJ58470.1| 814|Homo sapiens kinesin family member 6... 31 5.5
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 7.3
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 7.3
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 7.3
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 7.3
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 7.3
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 7.3
BC025316-1|AAH25316.1| 509|Homo sapiens phospholipase A2, group... 30 9.6
AK131361-1|BAD18513.1| 268|Homo sapiens protein ( Homo sapiens ... 30 9.6
AF220490-1|AAF44746.1| 509|Homo sapiens group III secreted phos... 30 9.6
AB209384-1|BAD92621.1| 457|Homo sapiens AE binding protein 2 va... 30 9.6
>BC117307-1|AAI17308.1| 758|Homo sapiens KIF6 protein protein.
Length = 758
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 681 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 737
>BC098418-1|AAH98418.1| 293|Homo sapiens KIF6 protein protein.
Length = 293
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 188 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 244
>BC022074-1|AAH22074.1| 265|Homo sapiens KIF6 protein protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 188 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 244
>AL832634-1|CAD89950.1| 257|Homo sapiens hypothetical protein
protein.
Length = 257
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 180 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 236
>AL590387-3|CAJ58479.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 737 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 793
>AL161439-1|CAJ58477.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 737 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 793
>AL160161-4|CAJ58476.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 737 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 793
>AL160161-1|CAI19716.1| 265|Homo sapiens kinesin family member 6
protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 188 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 244
>AL136087-6|CAJ58473.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 737 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 793
>AL136087-1|CAI19535.1| 265|Homo sapiens kinesin family member 6
protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 188 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 244
>AL035464-4|CAJ58470.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 331 GLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVSS 161
G G ++ + R+++P + KQSSTST LED + + S+ + DS S
Sbjct: 737 GTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDS 793
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +2
Query: 161 RGHSRIHKHIYRAHLFRDHKVFQTSRCGGLLHRIRLSPELRDQSTSPQTRHFGSSQPTNG 340
RG SR R H ++ SR R R SP+ R +S SPQ + S+ T
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSR-SPQRRGRSRSPQRPGWSRSRNTQR 550
Query: 341 AFRYLKHRSSFSSNPSLATKGSTSKLT 421
R R S + S AT+G + T
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRT 577
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +2
Query: 161 RGHSRIHKHIYRAHLFRDHKVFQTSRCGGLLHRIRLSPELRDQSTSPQTRHFGSSQPTNG 340
RG SR R H ++ SR R R SP+ R +S SPQ + S+ T
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSR-SPQRRGRSRSPQRPGWSRSRNTQR 550
Query: 341 AFRYLKHRSSFSSNPSLATKGSTSKLT 421
R R S + S AT+G + T
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRT 577
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +2
Query: 161 RGHSRIHKHIYRAHLFRDHKVFQTSRCGGLLHRIRLSPELRDQSTSPQTRHFGSSQPTNG 340
RG SR R H ++ SR R R SP+ R +S SPQ + S+ T
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSR-SPQRRGRSRSPQRPGWSRSRNTQR 550
Query: 341 AFRYLKHRSSFSSNPSLATKGSTSKLT 421
R R S + S AT+G + T
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRT 577
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +2
Query: 161 RGHSRIHKHIYRAHLFRDHKVFQTSRCGGLLHRIRLSPELRDQSTSPQTRHFGSSQPTNG 340
RG SR R H ++ SR R R SP+ R +S SPQ + S+ T
Sbjct: 457 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSR-SPQRRGRSRSPQRPGWSRSRNTQR 515
Query: 341 AFRYLKHRSSFSSNPSLATKGSTSKLT 421
R R S + S AT+G + T
Sbjct: 516 RGRSRSARRGRSHSRSPATRGRSRSRT 542
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +2
Query: 161 RGHSRIHKHIYRAHLFRDHKVFQTSRCGGLLHRIRLSPELRDQSTSPQTRHFGSSQPTNG 340
RG SR R H ++ SR R R SP+ R +S SPQ + S+ T
Sbjct: 282 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSR-SPQRRGRSRSPQRPGWSRSRNTQR 340
Query: 341 AFRYLKHRSSFSSNPSLATKGSTSKLT 421
R R S + S AT+G + T
Sbjct: 341 RGRSRSARRGRSHSRSPATRGRSRSRT 367
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +2
Query: 161 RGHSRIHKHIYRAHLFRDHKVFQTSRCGGLLHRIRLSPELRDQSTSPQTRHFGSSQPTNG 340
RG SR R H ++ SR R R SP+ R +S SPQ + S+ T
Sbjct: 540 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSR-SPQRRGRSRSPQRPGWSRSRNTQR 598
Query: 341 AFRYLKHRSSFSSNPSLATKGSTSKLT 421
R R S + S AT+G + T
Sbjct: 599 RGRSRSARRGRSHSRSPATRGRSRSRT 625
>BC025316-1|AAH25316.1| 509|Homo sapiens phospholipase A2, group
III protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 18 HRPVVMQLGRLLN-HDPVTLTMVDWKKLGTCLADAAPPIPC 137
H +L R L H P +T + W+ LGT APP+ C
Sbjct: 394 HCNCTRRLARFLRLHSPPEVTNMLWELLGTTCFKLAPPLDC 434
>AK131361-1|BAD18513.1| 268|Homo sapiens protein ( Homo sapiens
cDNA FLJ16400 fis, clone TUTER2000057, moderately
similar to Mus musculus AE-1 binding protein AEBP2 mRNA.
).
Length = 268
Score = 29.9 bits (64), Expect = 9.6
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -2
Query: 343 STVSGLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVS 164
S+V GG E G GG+ +++ SS L + + S M +DST+S
Sbjct: 178 SSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTIS 237
Query: 163 SGDGVESGPQGIGGAASA 110
SG + G G S+
Sbjct: 238 SGRSTPAMMNGQGSTTSS 255
>AF220490-1|AAF44746.1| 509|Homo sapiens group III secreted
phospholipase A2 protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 18 HRPVVMQLGRLLN-HDPVTLTMVDWKKLGTCLADAAPPIPC 137
H +L R L H P +T + W+ LGT APP+ C
Sbjct: 394 HCNCTRRLARFLRLHSPPEVTNMLWELLGTTCFKLAPPLDC 434
>AB209384-1|BAD92621.1| 457|Homo sapiens AE binding protein 2
variant protein.
Length = 457
Score = 29.9 bits (64), Expect = 9.6
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -2
Query: 343 STVSGLGGSEMTCLGRRRLIPKLGGKSDAVKQSSTSTCLEDFMITEEMCSVNMFMDSTVS 164
S+V GG E G GG+ +++ SS L + + S M +DST+S
Sbjct: 118 SSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTIS 177
Query: 163 SGDGVESGPQGIGGAASA 110
SG + G G S+
Sbjct: 178 SGRSTPAMMNGQGSTTSS 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,586,141
Number of Sequences: 237096
Number of extensions: 2265845
Number of successful extensions: 7125
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7121
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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