Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00939
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0478 + 8775892-8776377 45 7e-05
03_02_0484 + 8805053-8805538 44 9e-05
03_02_0483 - 8804021-8804485 44 9e-05
03_02_0485 - 8808139-8808618 44 1e-04
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 43 3e-04
01_01_0229 - 1943473-1943922 42 4e-04
01_01_0231 + 1951047-1951499 42 5e-04
01_01_0227 + 1933247-1933699 39 0.003
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 38 0.008
11_02_0041 - 7669692-7670312 35 0.073
02_02_0077 - 6586638-6587165 35 0.073
07_01_0533 + 3942813-3943164,3943244-3943458 33 0.22
06_01_1017 - 7951985-7952425 32 0.39
02_05_0736 - 31327010-31327030,31327047-31327556 32 0.52
03_05_0543 - 25404630-25405408,25405461-25405605 31 1.2
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 30 2.1
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 30 2.1
10_07_0141 + 13347648-13348331 29 2.8
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 2.8
12_02_1174 - 26696869-26698191 29 4.8
09_02_0292 + 6991202-6991937,6998629-6999185,6999489-7000196 29 4.8
02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837 29 4.8
06_01_1042 + 8187536-8187616,8187713-8188315 28 6.4
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 28 6.4
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.4
07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206 28 8.4
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 28 8.4
>03_02_0478 + 8775892-8776377
Length = 161
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Frame = +3
Query: 264 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 419
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 420 TVESRLSSDGVLTVIAPRTPAATKNERAV 506
+++ + +GVLTV P+ A + +++
Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSI 157
>03_02_0484 + 8805053-8805538
Length = 161
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +3
Query: 264 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 419
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 420 TVESRLSSDGVLTVIAPR 473
+++ + +GVLTV P+
Sbjct: 130 QIKASM-ENGVLTVTVPK 146
>03_02_0483 - 8804021-8804485
Length = 154
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +3
Query: 264 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 419
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 420 TVESRLSSDGVLTVIAPR 473
+++ + +GVLTV P+
Sbjct: 123 QIKASM-ENGVLTVTVPK 139
>03_02_0485 - 8808139-8808618
Length = 159
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +3
Query: 264 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 419
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 420 TVESRLSSDGVLTVIAPR 473
+++ + +GVLTV P+
Sbjct: 128 QIKASM-ENGVLTVTVPK 144
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +3
Query: 264 DVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPD 419
D+ EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 420 TVESRLSSDGVLTVIAPRTPAATKNERAV 506
V++ L +GVLTV P+ +A+
Sbjct: 119 QVKAGL-ENGVLTVTVPKAEVKKPEVKAI 146
>01_01_0229 - 1943473-1943922
Length = 149
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +3
Query: 264 DVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPD 419
D+ EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 420 TVESRLSSDGVLTVIAPRTPAATKNERAV 506
V++ + +GVLTV P+ +A+
Sbjct: 118 QVKASM-ENGVLTVTVPKAEVKKPEVKAI 145
>01_01_0231 + 1951047-1951499
Length = 150
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +3
Query: 264 DVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPD 419
D+ EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 420 TVESRLSSDGVLTVIAPRTPAATKNERAV 506
V++ + +GVLTV P+ +A+
Sbjct: 119 QVKAGM-ENGVLTVTVPKAEVKKPEVKAI 146
>01_01_0227 + 1933247-1933699
Length = 150
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 324 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 503
V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 504 VP 509
+P
Sbjct: 146 IP 147
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Frame = +3
Query: 249 IPVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDE------HGYISRQ----FTRRYAL 398
+ + D+ S EE+ V D +++ G+H++ + E G+ + + R AL
Sbjct: 144 VRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLAL 203
Query: 399 PENCNPDTVESRLSSDGVLTVIAPRTPAATK 491
P+ C+ V + L +GVL V P+T K
Sbjct: 204 PDECDKSKVRAEL-KNGVLLVTVPKTEVERK 233
>11_02_0041 - 7669692-7670312
Length = 206
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 375 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPSLKPARSG 533
+F RR+ +P + V +RL DGVLTV P+ P E V ++ A +G
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAGAG 192
>02_02_0077 - 6586638-6587165
Length = 175
Score = 34.7 bits (76), Expect = 0.073
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Frame = +3
Query: 243 G*IPVNLDVQHFSPEEISVKTADGYVIVEGKHEERQ----DEHG----YISRQ-----FT 383
G + + +D+ +P ++ V+ DG V+ R D+ G Y+ + F
Sbjct: 60 GALVLAVDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFM 119
Query: 384 RRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPSLKPARSG 533
RR+ LPE+ + D V + DGVLTV + P + V +K A +G
Sbjct: 120 RRFPLPESADLDGVRAEY-KDGVLTVTVDKKPPPEPKKPRVVEVKVAGAG 168
>07_01_0533 + 3942813-3943164,3943244-3943458
Length = 188
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 381 TRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPSLKPARSGRRLRSPLRK 560
TR LP CN T + S + + +P TP AT AVPS PA +G +P
Sbjct: 97 TRALELPAACNVKTPPASQCSTVGVPMPSPATP-ATPAAPAVPSETPAGTGGSKATPTTA 155
Query: 561 LRATKQNNDSRN---AVNQKSVIACVNFICI 644
T Q+ + A + +V+ V F I
Sbjct: 156 TTTTGQSASGGSVGKAASMATVVVSVAFALI 186
>06_01_1017 - 7951985-7952425
Length = 146
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +3
Query: 291 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLT 458
++V+ A + E + E +D +++ +F R ALP + + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 459 VIAPRTPAATK 491
V+ P+ PA +
Sbjct: 124 VVVPKEPAPAR 134
>02_05_0736 - 31327010-31327030,31327047-31327556
Length = 176
Score = 31.9 bits (69), Expect = 0.52
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +3
Query: 408 CNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPSLKPARSGRRLRSPLRKLRATKQNND 587
C P E + GV + + TPA K ++ + + R RRL R L A KQ
Sbjct: 97 CTPRREELEAAEAGVRRLFSRHTPAWMKKQKRLQRRERERDERRLNKQKRPL-ALKQQQL 155
Query: 588 SRNAVNQKSVI--ACVNFICI 644
A ++V+ A +NF+ I
Sbjct: 156 KAQAPMTRAVLLFAYLNFVVI 176
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 249 IPVNLDVQHFSPEEISVKTAD-GYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTV 425
I ++LD F EEI V + G++ G ER SR F + + LP +CN D +
Sbjct: 41 IHLSLDQLGFKREEIRVLVDNHGHLRTRG---ERPVAGNRWSR-FQKDFQLPADCNVDGI 96
Query: 426 ESRLSSDGVLTVIAPRTPA 482
++ ++ + + +TP+
Sbjct: 97 RAKFENEALTITLPKKTPS 115
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/67 (32%), Positives = 27/67 (40%)
Frame = +3
Query: 357 HGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPSLKPARSGR 536
HG Y LPE+ V SR S T +PR P V S + A+
Sbjct: 80 HGLSLVPIDHGYRLPESPPRPRVASRRQSTHAPTAPSPRQPGRLPAHLTVAS-RAAQPAS 138
Query: 537 RLRSPLR 557
RLR+P R
Sbjct: 139 RLRAPAR 145
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1
Query: 680 TIKRSVSQARTRNANKINTRYNTFLIHSVP 591
TI++ ++ RTRNAN I TR + FL H+ P
Sbjct: 351 TIRKRLTGDRTRNAN-ITTRDSPFLQHNTP 379
>10_07_0141 + 13347648-13348331
Length = 227
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 360 GYISRQFTRRYALPENCNPDTVESRLSSD-GVLTVIAPRTPAATKNERAVPSLKPARSGR 536
G+I+ +F RRY + ++ P+ E+ L+ D +L ++ A N RA S R R
Sbjct: 31 GFITNKFGRRYGVGDHGTPE--EAALAHDRAILAILGAHASPAALNFRAAFSDTELRFLR 88
Query: 537 RLRSPLRK 560
+P R+
Sbjct: 89 GPHAPSRR 96
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 77 DTNRTAFAIRTSDWRLLRTIS*RPSSRQRCPEITTVRGSRWRSPIETSVPPSPRIRINS 253
D NRT F R + LR ++ S R+ P+I VR + + P + P+PRI +++
Sbjct: 47 DKNRTGFLGREDFYNALRLVTVAQSGRELTPDI--VRSALY-GPAAAKI-PAPRINVST 101
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 255 VNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESR 434
V + + F E++ V+ D + ++ E G +F + LP+NC+ D V +R
Sbjct: 26 VEIALPGFRKEQVRVQV-DNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84
Query: 435 LSSDGVLTVIAPRTPAA 485
D L + P AA
Sbjct: 85 F-DDHKLIITLPLVAAA 100
>09_02_0292 + 6991202-6991937,6998629-6999185,6999489-7000196
Length = 666
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 547 LLNLLPDRAGLSDGTARSFFVAA 479
++ PD AGL DGT RSF A
Sbjct: 325 MIEFCPDSAGLRDGTGRSFLHVA 347
>02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837
Length = 222
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 453 LTVIAPRTPAATKNERAVPSLKPARSGRRLRSP 551
L + +P A T R+ PS PAR RLR P
Sbjct: 7 LFLASPVATAPTARARSTPSASPARPSLRLRRP 39
>06_01_1042 + 8187536-8187616,8187713-8188315
Length = 227
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 465 APRTPAATKNERAVPSLKPA---RSGRRLRSPLRKLRATKQNNDSRN 596
A RTPA T+ ERA + +PA GRR R+ R +Q SR+
Sbjct: 57 AARTPARTERERAPLAARPAGEEEEGRR-AGGWRRRRRRRQRRGSRS 102
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 477 PAATKNERAVPSLKPARSGRRLRSPLRKLRATKQNNDSR 593
P + +RA+P ++PA R+R LR L+ +++D++
Sbjct: 284 PPVEEKKRALP-VRPATKAERMRDCLRNLKQQNKDDDAK 321
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +3
Query: 30 RMLK*SKNVSAAIHPGIPTEPPSRSGL-------RTGAYSGRSPDGRHHANDVQRL 176
R++K + I P + PPSRS R+ + G S +HH +D Q L
Sbjct: 811 RVVKDQSSSELRIKPKVADRPPSRSSRSHSIGTDRSSTHEGSSHSKKHHEHDSQSL 866
>07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206
Length = 961
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 465 APRTPAATKNERAVPSLKPARSGRRLRSPLRKLRATKQNNDSRNA 599
A R AAT+ A+PS P R P + ++ ND R A
Sbjct: 33 ARRAAAATRRSSAIPSSTPPTQEDVRRGPDARFNIERRRNDRRAA 77
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 81 PTEPPSRSGLRTGAYSGRSPDGRHHANDVQRLLPSVEADGD 203
P + G R A P+G A D + L+ E+DG+
Sbjct: 60 PRRSGAEQGARRAAAGSEKPEGSEEAEDEEFLVEEYESDGE 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,959,507
Number of Sequences: 37544
Number of extensions: 371432
Number of successful extensions: 1377
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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