Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00938
         (708 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    37   0.42 
UniRef50_P41695 Cluster: Checkpoint serine/threonine-protein kin...    34   3.0  
UniRef50_A7IE74 Cluster: Peptidase S8 and S53 subtilisin kexin s...    34   3.9  
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    33   5.2  
UniRef50_Q1Q702 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_Q22NH5 Cluster: Putative uncharacterized protein; n=3; ...    33   9.1  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = -2

Query: 509 GDGNH*PSGGPYARMPRRAIKKPHNMF 429
           GDGNH PSG PYA +P RA  K  ++F
Sbjct: 2   GDGNHSPSGRPYASLPTRAKMKLTSLF 28


>UniRef50_P41695 Cluster: Checkpoint serine/threonine-protein kinase
           BUB1; n=2; Saccharomyces cerevisiae|Rep: Checkpoint
           serine/threonine-protein kinase BUB1 - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 1021

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 23/80 (28%), Positives = 40/80 (50%)
 Frame = -3

Query: 313 MYWIAKKYIEIDATIIKNIIKYKLVLRLIFYINKCRIVRYFKNFSFLNV*DVPNLFLSNR 134
           M WI+  YIE+D+   + +++   + R + YI      R    F  + +  + NLFLSN 
Sbjct: 65  MIWISTSYIEVDSESGQEVLR-STMERCLIYIQDMETYRNDPRFLKIWIWYI-NLFLSNN 122

Query: 133 V*KHT*FFKYLYFLHLHTQL 74
             +    FKY++   + T+L
Sbjct: 123 FHESENTFKYMFNKGIGTKL 142


>UniRef50_A7IE74 Cluster: Peptidase S8 and S53 subtilisin kexin
           sedolisin precursor; n=2; Proteobacteria|Rep: Peptidase
           S8 and S53 subtilisin kexin sedolisin precursor -
           Xanthobacter sp. (strain Py2)
          Length = 1224

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 469 RAYGPPDG*WLPSPWTLAMPGAEPSRGLPRF-PVIVYCV 582
           +AY P D   L  PW LA  G EPS G P+F   +VY V
Sbjct: 664 KAYEPVD---LNDPWLLAQSGLEPSEGNPKFHQQMVYAV 699


>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2

Query: 554  GRPRLGSAPGIAKVHG 507
            GR RLGSAPGIA+VHG
Sbjct: 969  GRQRLGSAPGIAEVHG 984


>UniRef50_Q1Q702 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Kuenenia stuttgartiensis|Rep: Putative
           uncharacterized protein - Candidatus Kuenenia
           stuttgartiensis
          Length = 422

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 307 NTFKNLNQYIFIVIFDVHLGPSTLWRVGNPLYILSFNKSFINILC 441
           N F  L +YIF+VI + H  P  L +  N L I   +   +NILC
Sbjct: 77  NKFSRLGKYIFLVISNFHKNPIVLLKTLNILRIRR-SSPLLNILC 120


>UniRef50_Q22NH5 Cluster: Putative uncharacterized protein; n=3;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1663

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 298  KKYIEIDATIIKNIIKYKLVLRLIFYINKC-RIVRYFKNFSFL 173
            K  +E +   +   +KY+LV RLI +  KC  +V+Y K +S L
Sbjct: 1304 KDDLEDEMVALSQCLKYQLVKRLIKFDKKCIAVVKYLKKYSLL 1346


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,651,122
Number of Sequences: 1657284
Number of extensions: 12229848
Number of successful extensions: 22230
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22219
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)