Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00936
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 53 3e-09
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 48 1e-07
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 48 1e-07
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 46 3e-07
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 26 0.33
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 24 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.4
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 22 7.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 7.2
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 53.2 bits (122), Expect = 3e-09
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +1
Query: 586 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIWTKEQPAN 759
TL +F L + K +G++VI+D +PN+ H WF +S +PY +Y++W + N
Sbjct: 98 TLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVWRDARIVN 155
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 47.6 bits (108), Expect = 1e-07
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 586 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIW 738
T+ + L + + G+++I+D +PN+ H WF S + EPY +Y+IW
Sbjct: 98 TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIW 148
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 47.6 bits (108), Expect = 1e-07
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 586 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIW 738
T+ + L + + G+++I+D +PN+ H WF S + EPY +Y+IW
Sbjct: 98 TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIW 148
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +1
Query: 586 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQS-----ENSTEPYTDYFIW 738
T+ + + L + KK ++VI+DL+PN+ H WF S N+T Y DY+IW
Sbjct: 96 TIKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIW 151
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 26.2 bits (55), Expect = 0.33
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 WVAWLCMLAGAIAVIVRAPKCGPPEPRTWY-ELGPLVGLELVD 479
WV C I VI++ P CGP ++ +L PL L D
Sbjct: 9 WVGGFCHSIIQIPVIIQLPFCGPNVIDHYFRDLQPLFKLACTD 51
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.8 bits (49), Expect = 1.8
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 7/34 (20%)
Frame = -3
Query: 392 CNSPGEHAQPG-------HPEQHEQRPTQVHPER 312
C+SPG + HP QH P+Q HP R
Sbjct: 299 CHSPGVYPSTAGFLPPSYHPHQHH--PSQYHPHR 330
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 285 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 410
E+ K +D W + L LF W+ L +L G +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 285 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 410
E+ K +D W + L LF W+ L +L G +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 425 GRAALGSAYNDCNSPGEHAQPGHPEQHEQ 339
GR ++GSA N S P P H+Q
Sbjct: 1841 GRRSVGSARNIPVSGSPEPPPPPPRNHDQ 1869
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 560 SALGRTRPEL*MSSAVPILL 501
+A+ RPEL M S +P+++
Sbjct: 41 AAMSVMRPELIMKSIIPVVM 60
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 345 VLFWVAWLCMLAGAIAVIVRAP 410
+ WV L AG + +I +AP
Sbjct: 484 LFLWVFTLACTAGTLGIIFQAP 505
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,404
Number of Sequences: 438
Number of extensions: 4505
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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