Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00935
         (727 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA...    79   1e-13
UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep: CG1456...    66   1e-09
UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila melanogaste...    60   4e-08
UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA...    56   1e-06
UniRef50_Q3JPC9 Cluster: Putative uncharacterized protein; n=3; ...    36   1.0  
UniRef50_A5K8R0 Cluster: Cell division protein FtsH, putative; n...    35   1.8  
UniRef50_Q9BL15 Cluster: Putative uncharacterized protein; n=2; ...    35   2.4  
UniRef50_Q1IPH5 Cluster: Magnesium and cobalt transport protein ...    33   5.4  
UniRef50_Q5DE82 Cluster: SJCHGC09137 protein; n=1; Schistosoma j...    33   5.4  
UniRef50_UPI00006CAF71 Cluster: hypothetical protein TTHERM_0046...    33   9.5  

>UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14567-PA - Tribolium castaneum
          Length = 135

 Score = 78.6 bits (185), Expect = 1e-13
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
 Frame = +2

Query: 23  LCQRPSFAGSRPIGFPDTPNRI-------TVAVGDRFGDDDSTTPRLPIEANGDLELIDR 181
           + QRP++AGSRPIG PD  +R        TVAV +R G+D  TT R+P++A GD +L+DR
Sbjct: 15  VAQRPTYAGSRPIGRPDLASRFKDPEEQSTVAVYNRVGED-GTTARIPVDARGDGQLVDR 73

Query: 182 LSKLPVDKQPFWFINWQALEAHRKTHKLTCR 274
           L++ P + +PFW +N   +EA R    +  R
Sbjct: 74  LNQWPREHRPFWLLNADHIEASRNGQNVETR 104


>UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep:
           CG14567-PA - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 65.7 bits (153), Expect = 1e-09
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = +2

Query: 137 RLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKTHKLTCRGL 280
           +LPI+A+GD E ++ LS+LPV++QPFWFIN+QA+EAHR + +    GL
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHRNSSRPNVGGL 181


>UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila
           melanogaster|Rep: CG33290-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 171

 Score = 60.5 bits (140), Expect = 4e-08
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
 Frame = +2

Query: 56  PIGFPDTPNRITVA---VGDRFGDDDSTTP---RLPIEANGDLELIDRLSKLPVDKQPFW 217
           P+  P  P  +  +   V +  G    T P   RLPI+A GD + ++RL +LPVD+QPFW
Sbjct: 82  PLVHPSAPEELLASYSPVNNAAGFPAQTAPDNSRLPIDARGDRDWVNRLKQLPVDQQPFW 141

Query: 218 FINWQALEAHR 250
            +N+QA+EA R
Sbjct: 142 LVNYQAIEAMR 152


>UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG33290-PA - Apis mellifera
          Length = 138

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 134 PRLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKTHK 262
           P LP++A G++ L++R+   P +KQPFW+INWQ ++ HR   K
Sbjct: 78  PDLPVDALGNINLVNRIKTWPREKQPFWYINWQQIQEHRGDSK 120


>UniRef50_Q3JPC9 Cluster: Putative uncharacterized protein; n=3;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia pseudomallei (strain 1710b)
          Length = 666

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +3

Query: 210 PSGSSTGKP*KRTGRPTNSRAEA*RIHRSHHAQSKRCYRPSK 335
           P+G +TG+     GRPTN+   A R HR+H A+  R  RP++
Sbjct: 80  PAGVATGRAAAPDGRPTNALRPARRAHRAHRARPAR--RPAR 119


>UniRef50_A5K8R0 Cluster: Cell division protein FtsH, putative; n=7;
           Eukaryota|Rep: Cell division protein FtsH, putative -
           Plasmodium vivax
          Length = 896

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 516 PTASNGS*IIIQRQQQKLTRKHLDRYIYSFSSKSRKLLYF*NESRKYDAQRSA 674
           PT  NG   I+++  +   +K   +Y    + K++K+L   NE + YDA R A
Sbjct: 718 PTTDNGKIEIVRKSAKNAVKKIRKKYAKDPNVKNKKILKVVNEHKPYDADRKA 770


>UniRef50_Q9BL15 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 639

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 17/77 (22%), Positives = 39/77 (50%)
 Frame = +2

Query: 116 DDDSTTPRLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKTHKLTCRGLTDS*I 295
           +D++   +L  ++ G L+L+D  S LP  K+    + W+  +   K +K +   +++  +
Sbjct: 316 EDEAVVAQLLRDSKGSLKLVDTSSLLPELKRETGVVQWKVFDRDMKLYK-SLEDISEEKM 374

Query: 296 PSCPVKTLLPPKQTQTQ 346
               V +L PP + + +
Sbjct: 375 KKVIVSSLFPPTEQEAK 391


>UniRef50_Q1IPH5 Cluster: Magnesium and cobalt transport protein
          CorA; n=2; Acidobacteria|Rep: Magnesium and cobalt
          transport protein CorA - Acidobacteria bacterium
          (strain Ellin345)
          Length = 291

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 6  PHLHWCCVSDPPSPDQGRLDSRIHLTE 86
          PHL W  +SDP SP+   L  R HL E
Sbjct: 6  PHLAWYDISDPASPELDELARRFHLHE 32


>UniRef50_Q5DE82 Cluster: SJCHGC09137 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09137 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 393

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
 Frame = +1

Query: 547 FNDNNKN*RENISIDIFIRFHPNHEN----------YYTFKTNPENMMRNVQRAKETTRC 696
           +NDNN    +N   D+ I F   H N          YY  +   +N MR + ++ + ++ 
Sbjct: 113 YNDNNSKGNDNDEDDVVIHFDSEHGNNNNDKKRRYYYYKQRKQTDNSMRYISKSYKKSKL 172

Query: 697 FYHTSFL 717
            Y T F+
Sbjct: 173 LYGTGFM 179


>UniRef50_UPI00006CAF71 Cluster: hypothetical protein
           TTHERM_00466130; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00466130 - Tetrahymena
           thermophila SB210
          Length = 1270

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 14/56 (25%), Positives = 33/56 (58%)
 Frame = +3

Query: 540 IIIQRQQQKLTRKHLDRYIYSFSSKSRKLLYF*NESRKYDAQRSACERDNEMFLSH 707
           I+  + +QK+T+K++ ++I +F+++    L F  E +K   ++ +    N+M + H
Sbjct: 772 IVFDKYRQKMTKKYISKWIENFNNQVNDFLLF--EMKKNSLKKKSKRLMNQMAIKH 825


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,096,754
Number of Sequences: 1657284
Number of extensions: 13249007
Number of successful extensions: 38042
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38013
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)