Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00935
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    66   6e-11
AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    60   2e-09
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         29   4.9  
M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein ( D.me...    29   4.9  
AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA...    29   6.4  

>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = +2

Query: 137 RLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKTHKLTCRGL 280
           +LPI+A+GD E ++ LS+LPV++QPFWFIN+QA+EAHR + +    GL
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHRNSSRPNVGGL 181


>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
 Frame = +2

Query: 56  PIGFPDTPNRITVA---VGDRFGDDDSTTP---RLPIEANGDLELIDRLSKLPVDKQPFW 217
           P+  P  P  +  +   V +  G    T P   RLPI+A GD + ++RL +LPVD+QPFW
Sbjct: 82  PLVHPSAPEELLASYSPVNNAAGFPAQTAPDNSRLPIDARGDRDWVNRLKQLPVDQQPFW 141

Query: 218 FINWQALEAHR 250
            +N+QA+EA R
Sbjct: 142 LVNYQAIEAMR 152


>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 414  NAAIGDRFDSDDTNVKPTSTVANKPGAESMVTLNPTASNGS*II---IQRQQQKLTRKHL 584
            +  I D  D  D  V PT  + N  G  S     P+A NG  ++       +    R H+
Sbjct: 2142 DTGIYDCLDIIDAVVWPTERMRNNGGRLSWKDWEPSAGNGGHVVHCWPPNHKDIRFRSHV 2201

Query: 585  DRYIY 599
            +RY+Y
Sbjct: 2202 NRYVY 2206


>M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein (
            D.melanogaster pecanexgene, exons 1 (partial) and 2. ).
          Length = 1938

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 414  NAAIGDRFDSDDTNVKPTSTVANKPGAESMVTLNPTASNGS*II---IQRQQQKLTRKHL 584
            +  I D  D  D  V PT  + N  G  S     P+A NG  ++       +    R H+
Sbjct: 1597 DTGIYDCLDIIDAVVWPTERMRNNGGRLSWKDWEPSAGNGGHVVHCWPPNHKDIRFRSHV 1656

Query: 585  DRYIY 599
            +RY+Y
Sbjct: 1657 NRYVY 1661


>AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA
            protein.
          Length = 1405

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = +2

Query: 131  TPRLPIEANGDLELIDRLSKLPVDKQPFWFIN--WQALEAHRKTHKLTCRGLTDS*IPSC 304
            TP L    +  +++ D L  +P++++    IN  W A EA R+ +KLT  GLT    P  
Sbjct: 941  TPVLATTVSFKVKIQDELLLVPIERKKLQDINIRWLAEEAGRRYNKLT--GLT----PLL 994

Query: 305  PVKTL--LPPKQTQTQCVSIEQRVI 373
             +KT      ++T    V++EQ ++
Sbjct: 995  RLKTADGFAYEETDPVSVALEQNML 1019


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,558,701
Number of Sequences: 53049
Number of extensions: 630006
Number of successful extensions: 1783
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1783
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)